Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1581 ATGGCTTCCCTTCATCCATCTGTTCCATCAGCAGGTTGTGAAACTAAAACCAATTTAGAATCCCTCCAAAGAACCGTGGCAGACATTGAAGCCACCACACTAGAAACCATGAAAAAGAGAGAAGAATGTGAAGTTGGTATATGCTTAACATGGAAGGATATATGGGTAAATAAAATTTTAAATGGAAAGAATGGAAGCAGATCAATTCTTCACGGACTAACAGGTTATGTTAAGCCAGGTCAACTTTTGGCCATAATGGGCCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACTTTAGCAGGCAGATTAGGCCCAAGCACAAGACGAACAGGGGAAATTTTGATCAACGGTCACAAACAGGAACTATCTTATGGAACCTCGGCTTATGTAACTCAAGATGATACGTTATTGACAACCTTGACTGTTAGAGAAGCAGTGTACTATTCAGCTCAACTTCAATTACCTGACTCAATGTCTAAGGAAGAGAAGAAAGAGAGAGCTGATTTTACAATCAGAGAAATGGGTCTGCAAGATGCTACTAACACAATAATTGGAGGATGGGGTGTTAAAGGCATAAGTGGAGGTCAGAAAAGGAGAGTTAGCATTTGCATTGAGATCCTTACACGTCCAAAACTTCTTTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCTGCTTCTTACTATGTTATGACAAGAATTGCTACCTTGGATCATAAAGATGGTATTCAGAGGACTATTATTACTTCCATCCATCAACCTGGTACCGAAGTTTTTCAACTTTTTCACAACCTTTGTCTTCTCTCTTCAGGTAGACTTGTATACTTTGGACCTGCTTCTGCTGCAACTGAGTTTTTTGCAATGAATGGTTTTCCTTGTCCTCCTCTCCAAAACCCATCTGATCATTTACTTAAAACTATAAACAAAGACTTTGATCAGGTCATTGAGACAGCATTGGCAGATAATGGAACAATGCCCACCGAAGAAGCAATTTGTATCCTTGTGAATGCATATAAATCATCTGAAATGTATCAAGATGTTCATAATGAAATAGCAGTCCTATCTAAAAAGCACACAAGTTCATTGGATTGCAAGAAAGAAGAGCATGCAAAGTTCCTTAATCAATGCCTAGTTCTTATCAAACGGTCATCAGTGAACATGTTTCGTGATCTAGGCTATTACTGGTTACGTTTTGGCATATATGTTGCATTGGCTATAAGTTTAGGCACTGTTTACTACGATTTGGGTACAAATTATGGCTCAATTAAGGATCGAGGTTCACTTCTTTCATTTGTCTCTGGCTTCTTAACTTTCATGAGCATCGGTGGATTTCCTTCCTTTGTGGAAGACATGAAAGTATTTCAACGAGAAAGACAGAACGGGCATTATGGTGTGATTGCTTATGTGATTGGGAACACTTTTTCCTCGATTCCGTTCATTTTTTTGGTTACAATGATTCCCGCAGCTATAACTTATTACCTCTCTGGTCTTCACAATGGATCCGAACACTTTTTGTACTTCGCTGCAGTTTTATTTTCGAGTCTAATGTTGGTGGAAAGTCTTATGATGATAGTAGCAAGCGTTGTCCCTAACCATCTAATGGGAATCATAACTGGTGCTGGAATCCAAGCAATCATGATTTTAATTGGAGGGTTCTTTAAATTGCCACATGATCTTCCTAAGCCAATTTGGCGATATCCATTACATTATGTTGCTTTTCATACATATTCCTTTGAAGGATTGTTTAAGAATGAGTATGAAGGACTAAGATTTAATGTAAAAAAGGGACAAGGCACTAGTAATTACATTACTGGTGAAGAGATTTTGAGAGATATTTGGCAAAGTGACATGAGTTACTCTAAATGGGTTGATCTTGGAATTTTGCTTGGGATGATTGTTTTGTATCGAGTTTTGTTCCTTGTTATAACCAAGATTACAGAGAAAGTGAAGCCTGTTCTTGGATCATTGTTAACTTGCAAGTCAATATCATCCGATACAATCGTGGAGAAGCCTGAGCTACTTCTTTAA 2031 0.3831 MASLHPSVPSAGCETKTNLESLQRTVADIEATTLETMKKREECEVGICLTWKDIWVNKILNGKNGSRSILHGLTGYVKPGQLLAIMGPSGCGKSTLLDTLAGRLGPSTRRTGEILINGHKQELSYGTSAYVTQDDTLLTTLTVREAVYYSAQLQLPDSMSKEEKKERADFTIREMGLQDATNTIIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMTRIATLDHKDGIQRTIITSIHQPGTEVFQLFHNLCLLSSGRLVYFGPASAATEFFAMNGFPCPPLQNPSDHLLKTINKDFDQVIETALADNGTMPTEEAICILVNAYKSSEMYQDVHNEIAVLSKKHTSSLDCKKEEHAKFLNQCLVLIKRSSVNMFRDLGYYWLRFGIYVALAISLGTVYYDLGTNYGSIKDRGSLLSFVSGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVIAYVIGNTFSSIPFIFLVTMIPAAITYYLSGLHNGSEHFLYFAAVLFSSLMLVESLMMIVASVVPNHLMGIITGAGIQAIMILIGGFFKLPHDLPKPIWRYPLHYVAFHTYSFEGLFKNEYEGLRFNVKKGQGTSNYITGEEILRDIWQSDMSYSKWVDLGILLGMIVLYRVLFLVITKITEKVKPVLGSLLTCKSISSDTIVEKPELLL* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1581 676 Pfam ABC-2 type transporter 376 587 IPR013525 GO:0016020|GO:0140359
Mtr4g1581 676 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 674 - -
Mtr4g1581 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 674 - -
Mtr4g1581 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 296 IPR003439 GO:0005524
Mtr4g1581 676 Pfam ABC transporter 71 221 IPR003439 GO:0005524
Mtr4g1581 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 289 IPR027417 -
Mtr4g1581 676 Pfam ABC-2 type transporter 253 306 IPR043926 GO:0140359
Mtr4g1581 676 Gene3D - 55 333 IPR027417 -
Mtr4g1581 676 SMART AAA_5 79 268 IPR003593 -
Mtr4g1581 676 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1581 Mtr-Chr4 27590212 27602505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1581 69 281 Calmodulin-binding Proteins AT2G36910 27.854 1.24e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1581 K05681 - gmx:100794527 946.806