Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1567 ATGGCTGAAGAACATAGATGCCAAGCAGCTCAACGTCTTTGTGCTAACAACTGCGGTTTCTTTGGAAGTCCTGCCATGCAAGATCTTTGCTCCAAATGTTACCGTGATTTGCAGATGAAGGAACAACGTTCTTCATCTGCAAAATTGGTTTTAAACCAAACGTTGATTCCTCAACAGTCTAATTCTTCTTCTCTAGATACGGGAATTATTCATCCATCTTCAACTTCACCGTCGGTGATGATAGTTTCTTCATCTACACCGACGGTGGAGTTGGTAGCTGCTGCTGCTGGACCTTCGGAGGCTGAACCACCGAAGGTCCAGCCAAATAGATGTGGGACATGCAGACGACGCGTGGGGCTGACAGGATTTAAGTGTCGATGTGGATTGACGTTGTGTGGGACCCACAGGTATCCGGAGCAGCATGGTTGTGGATTTGATTTTAAGGGGATGGGAAGGGAGGAGATCAAGAAGGCAAATCCAGTGGTGAAAGGAGAGAAGCTGAATAAGATCTGA 513 0.4678 MAEEHRCQAAQRLCANNCGFFGSPAMQDLCSKCYRDLQMKEQRSSSAKLVLNQTLIPQQSNSSSLDTGIIHPSSTSPSVMIVSSSTPTVELVAAAAGPSEAEPPKVQPNRCGTCRRRVGLTGFKCRCGLTLCGTHRYPEQHGCGFDFKGMGREEIKKANPVVKGEKLNKI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1567 170 SUPERFAMILY AN1-like Zinc finger 98 165 IPR035896 -
Mtr4g1567 170 Pfam AN1-like Zinc finger 111 147 IPR000058 GO:0008270
Mtr4g1567 170 Gene3D - 83 166 IPR035896 -
Mtr4g1567 170 ProSiteProfiles Zinc finger AN1-type profile. 105 151 IPR000058 GO:0008270
Mtr4g1567 170 ProSiteProfiles Zinc finger A20-type profile. 8 42 IPR002653 GO:0003677|GO:0008270
Mtr4g1567 170 Pfam A20-like zinc finger 12 35 IPR002653 GO:0003677|GO:0008270
Mtr4g1567 170 SMART A20_3 11 35 IPR002653 GO:0003677|GO:0008270
Mtr4g1567 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 170 - -
Mtr4g1567 170 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 170 - -
Mtr4g1567 170 Gene3D - 1 65 - -
Mtr4g1567 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 58 - -
Mtr4g1567 170 SMART AN1_Zf_4 111 148 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1567 Mtr-Chr4 27425125 27426119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1567 1 170 C2H2 Transcription Factor Family AT3G52800 49.143 7.16e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1567 - - mesc:110625469 221.861