Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr4g1540 | ATGGAAGATATCTTTCCACCTGGTTTTCGTTTCTTCCCAACTGAAGAAGAGCTTGTTAGCTTTTATCTAAATAATAAACTACAAGGAGTAACAAATGCTATAGATAGGGTTATTCCAGTCATTGATATCAATGGTGTAGAACCATGGAATCTCCCAACTCTTGCGGGAGAGCTTTGCCGCGAAGATAAAGAGCAATGGTTTTTCTTTTCACCAGGTCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACTACTGCTTGTGGATACTGGAAGGCAACAGGTTCTCCTGGTTATGTTTATTCTTCAGATAACAAAGTTATTGGGGTGAAGAAAACCATGGTTTTCTATAAAGGAAAAGCTCCAAGTGGAAGGAAAACAAAATGGAAGATGAATGAATACAGAGCCATTCAAGTCTCTAACCAATCCAACACTGCCACACCTCAGTTGAGGAGAGAATTCAGTTTGTGTCGAATATATGTAATATCAGGAAGCTTTCGAGCTTTTGATAGACGTCCATTAGAGAGAGAAAGAGTTGATCAATTACCGGTTAATGAGATTGATCAAAATCCATTTGGTGCCACATCTACTCATCAAAATGCAACAAGTTCATTTGAAATTTCTCAATTAGGGGGACTCCAAAGTACTCATATGCCACCAGAGGTTGTAGGAGGTTCAAATAGCACTAATTGGCATGTAAATAGTAACAATGAAAATAATGGTGATGAGGTTCAATTCCAAGAATCACTATGGGAATGGGACAGTGAACATTTTAATTGGTCCTAA | 786 | 0.3868 | MEDIFPPGFRFFPTEEELVSFYLNNKLQGVTNAIDRVIPVIDINGVEPWNLPTLAGELCREDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRIYVISGSFRAFDRRPLERERVDQLPVNEIDQNPFGATSTHQNATSSFEISQLGGLQSTHMPPEVVGGSNSTNWHVNSNNENNGDEVQFQESLWEWDSEHFNWS* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr4g1540 | 261 | Gene3D | NAC domain | 14 | 165 | IPR036093 | GO:0003677|GO:0006355 | |
Mtr4g1540 | 261 | ProSiteProfiles | NAC domain profile. | 5 | 162 | IPR003441 | GO:0003677|GO:0006355 | |
Mtr4g1540 | 261 | Pfam | No apical meristem (NAM) protein | 6 | 135 | IPR003441 | GO:0003677|GO:0006355 | |
Mtr4g1540 | 261 | MobiDBLite | consensus disorder prediction | 214 | 239 | - | - | |
Mtr4g1540 | 261 | SUPERFAMILY | NAC domain | 5 | 160 | IPR036093 | GO:0003677|GO:0006355 | |
Mtr4g1540 | 261 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 5 | 260 | - | - | |
Mtr4g1540 | 261 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 5 | 260 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr4g1540 | Mtr-Chr4 | 27131182 | 27133605 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr4g1540 | 8 | 261 | NAC Transcription Factor Family | AT3G44350 | 51.765 | 3.69e-83 | 247 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Mtr4g1540 | NAM | 1.6e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr4g1540 | - | - | cam:101497878 | 425.631 |