Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1525 ATGGCCAACTACCTAAAGAACATAGTTCTTACTAAAATCACCTTGTTGTATACGGTTTTGTTTCAGCAACTATTGTTCCCTCTAGTGGTTAACTCTTATGATAATTTAGCCCTGAATTGTGGCCACTCCATAGATACAACATTTGAAAATCGAACCTGGGTTGGTGACATGGATGACACCAAACTATTCTCTATCATTGAACCACAGACTGAATTTTCATCTATCAAATCCAAACCCAACCCTAACTCTGATTCTGTTAACCAAATTCCGTTTGCCTCAGCACGTATTTCATTTTCCAACTTCACATTCTCATTTCCTTCCGTCGCTAATAGCCCTATTTTTCTTCGCCTTCATTTTTACCCAACATCGTATCAAAACTTTGAAACCTTCGACGCCCTCTTCACCGTCAAAGTTGGAACCAATGTCACCCTTCTCAATGACTTTAACCCCGCACTTTGGCTTCAAAACGATAACAAGACAATCACGAAAGAGTACTGCCTCAAAATGAAACCAACTGAGAAGTTAAATATAACTTTCATTCCAAACACCATAAATCAACCAAAGGCTTATGCTTTCATCAACGGAATTGAGATCGTGTCCATGCCTTCTTTTCTCTATTACACAAACCTCAATGACTCAAATCATCATTTAAAGTTACTTGGCCTTGAAAACATGAAATACAAAATCAGCAGTGACAAAGTGTTAGAGACGGTTTATAGAGTCAGCGTTGGTGATAATCAAGTTCCACGAAGTAATGACACAGGTATGTTTCGTTATTGGGACAACGATTTTCCTCGTTACTTGGAGAAACAATATCCACTAAGTGTATCAAATGATTTTACACATAATCTCAACTATATAAACAATACCATTCCAAACTACACGGCACCAGAAGTTGTATACTTAACTGCAAGAAGTTATGGAATGGATGCGACAAAGGATTATAATGTAACTTGGAATTTTGAAGTTGATTCTGCCTTTACTTATTTGGTAAGATTGCATTTTTGCGAGTTTGATTGGCATATAAAGAATCAAGGTGATAGAGTTTTTCAGATTTTTATAGATGATAATTTGGCTGAACGAAATGCTGATGTGATTCATTGGAGTGGTGCTCGTATGGTTCCTGTTCATAAGGATTATGTTGTGACTATGTACTCTCGAGAAGGAAGCTCGCAAATTAAAAGAGTTAATCTTTCAATAAAGCTACAACGAGCACCAGAAAATATCTACTCAAAATACCGTAATGTCACATTGAATGGGATCGAGATTTTGAAAATAAGTGACAAAAATAACAATCTCGCAGGATCAATATCAAAATCCAATGATCTATCTCACCCGCATCAAGTATTGTCAACCAAAACGTCAAAAAAATATAAGATTGTCTTAGTTTCCTTAGAGATCACCTTAGCTTCTGTTAGTGTGCTTATGGTGGGTTTCACCATTTATTGGCAATGGCGATATCGTGATGAGGATTCTATGGAAGATAACTCGTCAGAAACAAAGAGTGAAGGGTTGCCATCTTTACCGCCCCATTTGTGCCGCTACTTTACAATTGCAGAGATAAAAGCAGCCACAAATAACTTTGATGATGATTTAATCATCGGAGTTGGAGGGTTTGGCAACGTGTATAAAGGTTTCATCGATAAATCCACACCCGTTGCAATAAAACGTCTCAAACCAGGCTCTCAACAAGGGGCCAACGAGTTCATGAATGAGATCGAGTTGCTCTCTCAACTTCGCCACATTCATCTGGTATCCCTCGTCGGGTACTGCAACGGCAACAAAGAGATGATTCTGATTTATGAGTTCATGCAACGTGGTACTCTTTGTGAGTATCTATATGGTTCCAATAACCAACCCCTACTTTGGAAGCAAAGGCTTGAGATTGTATTGGGTGCCGCAAGAGGGCTGAATTATCTTCATGCTGAGGTGAAACACAAGATAATACATCGTGATGTGAAAAGCACCAACATATTATTGGATGAGAAATGGGTGGCTAAGGTTTCCGACTTCGGGTTATCCAAGGTGGGACCAACGGGGATATCAACTACCCATGTCAGCACAATGGTGAAGGGGAGTCTTGGGTATTTAGATCCTGAGTACTATATGCTCCAAAGGCTTACCCTAAAATCTGACGTGTACTCATTCGGTGTGGTGCTTCTTGAGGTATTGTGTGCAAGGCCACCTTTGGTTCGCGATTTAGATAAGAAGACGGCTAGTCTAGTTTGTTGGTTTCAAAGATGTTACGATGAAGGTGTTCCAATTAAACAGATCGTAGATCCATTCCTGAGGGATTCTATCACAAATGAATGTTTGAAATATTACTGCAAGTTGGCGTTGAGTTGTTTGCATGATGATGGGACTCAACGACCCTCAATGAATCAAGTGGTTGTGAGTTTGGAGTCTGTGTTGCAGTTGGTGGTGAGTGACGAAGATAGCCAGTTTGGTATGACCAAAAAAGAGAGAACATGTATGAAAGGTCTATGCTTCTCGAAATTTATGAGTGATAAAGGGAGTGAACTGCATTTTGCGAGATCCCACACCTTGAAGGAGAGCAATGTCTCGGCGAGGGCAAGTACTCATGAACACCCTTTCTCTGAAATTGGTAATCAAAGACCACGATCGTATTCATGTCAAAACCTTAGAGTTTATATTTAG 2658 0.395 MANYLKNIVLTKITLLYTVLFQQLLFPLVVNSYDNLALNCGHSIDTTFENRTWVGDMDDTKLFSIIEPQTEFSSIKSKPNPNSDSVNQIPFASARISFSNFTFSFPSVANSPIFLRLHFYPTSYQNFETFDALFTVKVGTNVTLLNDFNPALWLQNDNKTITKEYCLKMKPTEKLNITFIPNTINQPKAYAFINGIEIVSMPSFLYYTNLNDSNHHLKLLGLENMKYKISSDKVLETVYRVSVGDNQVPRSNDTGMFRYWDNDFPRYLEKQYPLSVSNDFTHNLNYINNTIPNYTAPEVVYLTARSYGMDATKDYNVTWNFEVDSAFTYLVRLHFCEFDWHIKNQGDRVFQIFIDDNLAERNADVIHWSGARMVPVHKDYVVTMYSREGSSQIKRVNLSIKLQRAPENIYSKYRNVTLNGIEILKISDKNNNLAGSISKSNDLSHPHQVLSTKTSKKYKIVLVSLEITLASVSVLMVGFTIYWQWRYRDEDSMEDNSSETKSEGLPSLPPHLCRYFTIAEIKAATNNFDDDLIIGVGGFGNVYKGFIDKSTPVAIKRLKPGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNGNKEMILIYEFMQRGTLCEYLYGSNNQPLLWKQRLEIVLGAARGLNYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMLQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVCWFQRCYDEGVPIKQIVDPFLRDSITNECLKYYCKLALSCLHDDGTQRPSMNQVVVSLESVLQLVVSDEDSQFGMTKKERTCMKGLCFSKFMSDKGSELHFARSHTLKESNVSARASTHEHPFSEIGNQRPRSYSCQNLRVYI* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1525 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mtr4g1525 885 SUPERFAMILY Protein kinase-like (PK-like) 503 800 IPR011009 -
Mtr4g1525 885 Gene3D Phosphorylase Kinase; domain 1 490 603 - -
Mtr4g1525 885 CDD STKc_IRAK 534 801 - -
Mtr4g1525 885 Gene3D Transferase(Phosphotransferase) domain 1 604 823 - -
Mtr4g1525 885 Pfam Malectin-like domain 38 425 IPR024788 -
Mtr4g1525 885 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Mtr4g1525 885 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 32 864 - -
Mtr4g1525 885 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Mtr4g1525 885 Gene3D - 234 427 - -
Mtr4g1525 885 Gene3D - 35 202 - -
Mtr4g1525 885 PANTHER OS07G0166700 PROTEIN 32 864 IPR045272 GO:0004714|GO:0006468
Mtr4g1525 885 SMART serkin_6 528 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1525 885 ProSiteProfiles Protein kinase domain profile. 528 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1525 Mtr-Chr4 26960588 26963245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1525 34 842 Receptor kinase-like Gene Family AT3G51550 43.483 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr4g1525 Malectin_like 1.6e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1525 - - mtr:MTR_7g015250 1118.22