Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1518 ATGTCTTTCAACAAGAAAAGGCTTATGAGAAGAGTGTTCTCAACAAATATTGGAAGTTGTGGCTGTGCAAAAAAGAAAGCAATTGAAGTCCACGAGCCTATTCAAAAGACCAAAATTTCCATTAGCCAAATTAGCAAGGCTTCATCCAACACAACTTTAGGTGAACGAAAGGGTGCCGGTTGTAGCGTCGATCACAGCGACGATTTCTCCACCACCACTTTCTCTGAAGCTGAAACTACACAAAACTACTCTCCACACAAGCATAGCCCACTATCAAACACTGTGGTCGTTGAAAAGGATTCTGATAATCCATATCATGATTTCAAACACTCTATGCTTCAAATGATCTTCGAGGATGAGATCGATTCGGAGGATGATCTTCGAGTTCTTCTTCGGTGTTTTCTTCATCTCAATGATACTTGTTATCACCTTGTCATCGTTAAAGTCTTTAATGATATATGTCATGAAGCTTTTTCCGACGACAAGGTTTGTACTACTACTTCGTCTGCTATCAAACCTTCTAATATACATGTTTATGAAAATGAGTAA 549 0.388 MSFNKKRLMRRVFSTNIGSCGCAKKKAIEVHEPIQKTKISISQISKASSNTTLGERKGAGCSVDHSDDFSTTTFSEAETTQNYSPHKHSPLSNTVVVEKDSDNPYHDFKHSMLQMIFEDEIDSEDDLRVLLRCFLHLNDTCYHLVIVKVFNDICHEAFSDDKVCTTTSSAIKPSNIHVYENE* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1518 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 163 IPR038933 GO:0045892
Mtr4g1518 182 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mtr4g1518 182 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 163 - -
Mtr4g1518 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 95 155 IPR006458 -
Mtr4g1518 182 Pfam Transcriptional repressor, ovate 101 156 IPR006458 -
Mtr4g1518 182 ProSiteProfiles OVATE domain profile. 97 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1518 Mtr-Chr4 26866699 26867247 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr4g1518 Ovate 8.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1518 - - mtr:MTR_4g052040 215.312