Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1517 ATGTCTTCCAACAAGAAAAACCTTATAAGAACATTTTTCACATCAAATGGAAGTTGTGGATGTGCAAAAACAAAAGCAATTCAAGTACACGAGCCAAAGCCAACCCAAAAACCCAAAAAATTCATTAAGCAAAGGATCACAAACCCAAGTAGTAAGGGTTCTTCAACTACAACTTCAGGTGAAGGATATGGCGCCGTTTGTAGCATCGATGATAGCGATGATTTCTCCACCACGACGTTCTCGGATGTTAGCACAACAAACAACTACTCTGCACCCAAACAAAGCCCACTAATGAACACGGTGGCGGTAGAGAAGGATTCTGAGGATCCGTATCATGATTTCAAACATTCTATGCTTCAAATGATCTTCGAGAATGAGATCGATTCAGAAGACGATCTTCAAGATCTTCTCCGGTGTTTTCTTCATCTCAATTCTAGTTGTTATCATGGTGTTATCGTAAAAGTCTTCAATGATATATGTCATGAAGCTTTCCCCGACAAGGTTGGTAGCACTACTATAAAACCTTCCGGGTAA 534 0.4007 MSSNKKNLIRTFFTSNGSCGCAKTKAIQVHEPKPTQKPKKFIKQRITNPSSKGSSTTTSGEGYGAVCSIDDSDDFSTTTFSDVSTTNNYSAPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHGVIVKVFNDICHEAFPDKVGSTTIKPSG* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1517 177 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Mtr4g1517 177 MobiDBLite consensus disorder prediction 41 60 - -
Mtr4g1517 177 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
Mtr4g1517 177 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 167 - -
Mtr4g1517 177 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 167 IPR038933 GO:0045892
Mtr4g1517 177 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Mtr4g1517 177 MobiDBLite consensus disorder prediction 30 60 - -
Mtr4g1517 177 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1517 Mtr-Chr4 26858288 26859534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr4g1517 Ovate 9.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1517 - - mtr:MTR_4g052040 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1517 4 26858288 26859534 Mtr4g1517 4 26858288 26859534 ECH