Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1512 ATGGTGCTGTCTACTCGATCAATGGTTTTCAATGTTATCCTATTCATAGGTTATTGTTTTTGTCTTGGTAGAGCTATTGATTGTGGTGGAAATCTTGTTGCAAAAACCATTACTGTTGATCAAAAAGGAAGAGGAATGTTCAAAAGGATTCAACAAGCTGTTGATTCAATAAAGCATAACAATGATCGCTGGATTAAGATTCAAATTATGCCTGGAAAATACAGGGAAGAGATTTCTATTCCATATGACAAGCCATGCATCATTTTAAAAGGATCCGATAGAAGAACCACAACAATTTATGATGATGATATTCAATCAAAAGCAATATTCACTTCATCTCCACCTAACGTGGTTTTGAGTGGTATTACAATTGAGAACACACATGGAAGTAATGGAAAGGCAGTAGCTGCTACTATATTCGGTAATAATTCAGCTATCTTTGATTGTAGTTTCTTAGGTTATCAAGACACTCTGTGGGATGCATTGGGACGTCATTACTATAAGAATTGTTATATTCAAGGTGAAGTTGACTTCATTTTTGGTCAAGCCCAATCTTATTTTGAGGATTGTGTGATAAACGCAACACAAGGTCATGCTCAACCTGCAGGTTTTATCACAGCACAACGTAGGTATTCATCAACAGAATCAACTGGTTTTATTTTTAAAGGAGGACGTGTTGAAGGAATTGGTAAAGTGCATCTTGGAAGAGCATGGGGTCCTTACTCTAGGGTTTTATTTTGGGGAACACACCTTTCTGCAGTGGTACTCCCTCAAGGATGGAATGCTTGGAATTACCAAGGGCAAGAGTAA 810 0.3728 MVLSTRSMVFNVILFIGYCFCLGRAIDCGGNLVAKTITVDQKGRGMFKRIQQAVDSIKHNNDRWIKIQIMPGKYREEISIPYDKPCIILKGSDRRTTTIYDDDIQSKAIFTSSPPNVVLSGITIENTHGSNGKAVAATIFGNNSAIFDCSFLGYQDTLWDALGRHYYKNCYIQGEVDFIFGQAQSYFEDCVINATQGHAQPAGFITAQRRYSSTESTGFIFKGGRVEGIGKVHLGRAWGPYSRVLFWGTHLSAVVLPQGWNAWNYQGQE* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1512 269 Pfam Pectinesterase 37 265 IPR000070 GO:0030599|GO:0042545
Mtr4g1512 269 PANTHER PECTINESTERASE 1 269 - -
Mtr4g1512 269 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 269 - -
Mtr4g1512 269 SUPERFAMILY Pectin lyase-like 33 266 IPR011050 -
Mtr4g1512 269 Gene3D - 30 269 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1512 Mtr-Chr4 26771385 26773616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1512 27 269 Carbohydrate Esterase AT2G19150 44.706 2.88e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1512 - - mtr:MTR_5g088290 386.341