Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1508 ATGGCTATGCAATTACCTTCCTCATCCTCTTCATTTTCCTATCGATTCACTTACCAAGTGTTCCTCAGCTTCAGGGGCAGTGATACTCGTAACGGTTTTACTGGCCATCTCTACAAGGCTCTTACTGACAAGGGAATCCACACCTTCATTGATGACCGTGAGCTGCAAAGTGGGGATGAAATCAAACCATCACTCGACAATGCCATTGAAGAGTCTAGGATCTTCATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGTCTCGTTTTGCCTGTTTTCTATGGCGTGGATCCTACTCACATACGAAATCAAACTGGAAGTTATGGTGAACATCTCACTAAGCACAGAAAGAATTTCCAAAATAACAAGAAAAACATGGAGCGGTTGCATCAATGGAAGTTAGCTCTGACCGAAGCTGCTAACTTGTCCGGCCACCATTTTAGTCCTGGATATGAATACAAGTTTATTGGAAAGATAGTCAAATACGTCAACAACAAGATCAGTCGTCATCCCTTACATGTTGCCACTTACCCTGTTGGGTTGCAGTCTCGAGTACAACAAGTGAAATCGCTTCTTGATAAAGGATCTAATGGTGGAGTCCGCATGATAGGACTTTATGGTATTGGAGGCATGGGAAAATCAACACTTGCAAAAGGAATTTATAATTTTATTGCTGATCAATTTGAATGCTCATGTTTTCTTGAAAACGTGAGAGAGAATTCAGCTTCAAATCAATTGAAACATCTCCAGGAGGAACTCCTTTTAAAAACACTAGCACTGAAAATTAAGTTAGGAGGTGTTAATGACGGAATTCCTCATATAAAGGAAAGGCTACATACAAAGAAGATTCTTTTGATTCTAGATGATGTTGACAATTTGGAACAACTGCATGCTTTGGCTGGAGGACGTGATTGGTTCGGCTGTGGAAGCAAAGTTATCATTACCACTCGTAACAAACACTTACTAAGCAATCATGAGATAGAAATTATGCATGAAGTAGAAGGGATGTCTACGGAAAATGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATTACAATGTTCCTTCAAGTTATGAGGAGATTTTAAACCGTGCAGTTGCGTATGCTTCTGGCCTTCCATTAGCTATAGAAGTCGTGGGTTCCAACTTGTTTGGAAAGAGTATTGCAGAATGTGAGTCTACATTAGATAAGTATGAAAGAATTCCACATGAAAATATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGATGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTTGTTCAAAGGATGTAGATTGGCAGAAGTCGAAGAGATACTTCAAAGTCATTATGGTTATTGCATAAAGAGCGACATTCGAGAGTTGGTTGATAAGTCTCTCATAAAGTGCCACTTGGAAGTGACATTACATGACTTGCTAGAGGTCATGGGTAAAGAAATCGTCCGGAAAGAATCACCTAAAAAGCCTGAAAAGCGTAGTAGGTTGTGGTGTCGCAATGACATAGTTCATATTTTACAGGAAAACAAAGGAACAAGTAAAATTGAGATGATATATCTGAATTCTCGCTCAACGGATCCCGTAATAGACTGGAATGGAAAGGCCTTCAAGAATATGACAAATCTCAAAACACTTATTATTAAAAATGTCTCTTTTTCTAAAGATCCCAAGTATCTTCCAAGCAGTTTGAGAGTATTGAAATTGAATGGATGTTCTTCAGAGTCTCTATCATCTATTATTTGCAGCAAGAGGTTTGAGGATATGAAAGTCTTGACATTGGACGAGTGTCAATATTTAACCCATATACCCAATGTCTCAGGTCTTCCAAATTTAGAAAAATTCTCGTTTCGATTGTGTGATAATTTAATTGCAATTCACGATTCGATTGGGAACCTAAATAAACTTGAAATCTTAAATGCATCTGGATGCATCAAGCTTGAGAGTTTTCCACCCTTATGGCTGCCCTCTCTTAAGGAATTGGATCTCTCTTTTTGTGAGAGACTCAAGAGTTTTCCAGAATTATTATGTAAGATGACAAATACAAAAGAGATTGGAATGTGTATAACTTCCACAACAGAATTGCCATTTTCATTTCAAAATCTCAGCTTATCACTACAGCAATGTGAAATGCTCAGGTTCCCAAAACATAATGAGAAAATGCATTCAATAATGTTTTCAAATGTGGAAGAGCTTGATTTCAATCCTAAATATCTCCCATATGAATGTCTCCAAATATTTCTCAAGTCGTGTGTTAATGTGAAATATCTAAGCTTATCAGATGGCAATTTCAAAATTCTTCCCGAGTGCCTTAGTGAATGTCACCTTATGAGGACCCTCCAATTGAATTTCAACGAGCATCTTGAGGAAATTAGAGGGTTTCCACCGAATCTCAAATATCTTGAAGCATTTGGATGTAAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGCAATTACATGAGGCTGGGTGCACCAGATTTTCTTTCCCAAACGGAACAGAGGGGATTAGGATTCCAGATTGGTTCGAGCATCAAAGCAGGGGTCAATCAATTTCTTTCTGGTTCCGTAAAAAGATCCCTTCTATAAATTTTATTATTATTCTTCCGGATGTTGAATATATGTTCGACTTAAATTTGTTTGTCAATGGTTATGACTGTACACCTCTAGAAGATCAATTGGATTGGCTGACTTATTCGGGACATACATATTTGTTTGAAATGAATTTGGAAGAAAATGTTGAACTCTGTAAAATATTTCACGCGATCAATTTGGAGTCTGAAATGGACAAAGCACTTTTAAAAAATGAATGGATCTATGTGGAGTTTAGCATTCAGGTGTCTGAGTATTTGAATAAAAGGTTACGAAGAGCAGATATGGGAATCCACGTGTTGAAGGAGAAAAACAACACAAATGAGGATGTGATATTCACCAATCCTTATAGTAGAAAGAGAAAATTTGATGAATATGTTGCTGCTTCATTATCAGAATTTCATCCTACGCTGACAGATCATAGATTTGTGGAAGTGGGAGTTTCAGAGACAGAAATTTTGCAGCAGCAACATCTAGCTTTAGTGTCAGGCATGCGGAACTTGGTGCTTACTGAAACAATAGGAAAGGAACAGCATGGCTAG 3204 0.3767 MAMQLPSSSSSFSYRFTYQVFLSFRGSDTRNGFTGHLYKALTDKGIHTFIDDRELQSGDEIKPSLDNAIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPTHIRNQTGSYGEHLTKHRKNFQNNKKNMERLHQWKLALTEAANLSGHHFSPGYEYKFIGKIVKYVNNKISRHPLHVATYPVGLQSRVQQVKSLLDKGSNGGVRMIGLYGIGGMGKSTLAKGIYNFIADQFECSCFLENVRENSASNQLKHLQEELLLKTLALKIKLGGVNDGIPHIKERLHTKKILLILDDVDNLEQLHALAGGRDWFGCGSKVIITTRNKHLLSNHEIEIMHEVEGMSTENALELLRWMAFKNYNVPSSYEEILNRAVAYASGLPLAIEVVGSNLFGKSIAECESTLDKYERIPHENIQKILKVSFDALDEEQQSVFLDIACLFKGCRLAEVEEILQSHYGYCIKSDIRELVDKSLIKCHLEVTLHDLLEVMGKEIVRKESPKKPEKRSRLWCRNDIVHILQENKGTSKIEMIYLNSRSTDPVIDWNGKAFKNMTNLKTLIIKNVSFSKDPKYLPSSLRVLKLNGCSSESLSSIICSKRFEDMKVLTLDECQYLTHIPNVSGLPNLEKFSFRLCDNLIAIHDSIGNLNKLEILNASGCIKLESFPPLWLPSLKELDLSFCERLKSFPELLCKMTNTKEIGMCITSTTELPFSFQNLSLSLQQCEMLRFPKHNEKMHSIMFSNVEELDFNPKYLPYECLQIFLKSCVNVKYLSLSDGNFKILPECLSECHLMRTLQLNFNEHLEEIRGFPPNLKYLEAFGCKSLSSSSRRMLLSQQLHEAGCTRFSFPNGTEGIRIPDWFEHQSRGQSISFWFRKKIPSINFIIILPDVEYMFDLNLFVNGYDCTPLEDQLDWLTYSGHTYLFEMNLEENVELCKIFHAINLESEMDKALLKNEWIYVEFSIQVSEYLNKRLRRADMGIHVLKEKNNTNEDVIFTNPYSRKRKFDEYVAASLSEFHPTLTDHRFVEVGVSETEILQQQHLALVSGMRNLVLTETIGKEQHG* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1508 1067 SMART till_3 17 160 IPR000157 GO:0007165
Mtr4g1508 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 447 IPR027417 -
Mtr4g1508 1067 PRINTS Disease resistance protein signature 220 235 - -
Mtr4g1508 1067 PRINTS Disease resistance protein signature 295 309 - -
Mtr4g1508 1067 PRINTS Disease resistance protein signature 388 402 - -
Mtr4g1508 1067 PRINTS Disease resistance protein signature 674 690 - -
Mtr4g1508 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 968 IPR044974 GO:0006952
Mtr4g1508 1067 PANTHER ARCHAEAL ATPASE 28 968 - -
Mtr4g1508 1067 SUPERFAMILY "Winged helix" DNA-binding domain 424 528 IPR036390 -
Mtr4g1508 1067 SUPERFAMILY L domain-like 546 840 - -
Mtr4g1508 1067 Gene3D Ribonuclease Inhibitor 511 868 IPR032675 -
Mtr4g1508 1067 Gene3D - 15 182 IPR035897 -
Mtr4g1508 1067 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr4g1508 1067 Pfam TIR domain 18 183 IPR000157 GO:0007165
Mtr4g1508 1067 Gene3D - 183 348 IPR027417 -
Mtr4g1508 1067 Gene3D - 354 437 IPR042197 -
Mtr4g1508 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Mtr4g1508 1067 Pfam NB-ARC domain 201 429 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1508 Mtr-Chr4 26716200 26721284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1508 12 761 WRKY Transcription Factor Family AT4G12020 28.091 6.69e-64 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1508 - - mtr:MTR_4g051682 1296.95