Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1505 ATGGCTATGCAATCACCTTCCTCATCCTCTTCATTTTCCTATCGATTCACTTACCAAGTGTTCCTCAGCTTCAGGGGCACTGACACTCGTGACGGTTTTACTGGCCATCTCTACAAAGCTCTTACTGACAAGGGAATCCACACCTTCATTGATGACCGTGACCTGCAAAGTGGGGATGAAATCAAACCATCACTCGACAATGCCATTGAAGAGTCTAGGATCTTCATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTTCACATCATTCACTGCTACAAGACAAAAGGTCGTCTCGTTTTGCCTGTTTTCTATGGCGTAGATCCTACTCACATACGACATCAAAGTGGGAGTTATGGTGAACATCTCACTAAGCACGGAAAGAGTTTCCAAAATAACAAGAAAAACATGGAGCGGTTGCATCAATGGAAGTTAGCTCTGACCGAAGCTGCTAACTTGTCCGGCTACCATTTTAGTTCTGGATATGAATACAAGTTTATTGGAGATATAGTCAAATACGTCTCCAACAAGATCAGTCGTCAGCCCTTACATGTTGCCAATTACCCTGTTGGATTGCAGTCTCGAGTACAACAAGTGAAAGCGCTTCTTGATAAAGGATCTGATGATGGAGTCCGCATGTTAGGACTTTATGGCATTGGAGGCATGGGTAAATCAACACTTGCGAAAGCAATTTATAATTTTATTGCTGATCAATTTGAATGCTCATGTTTTCTTGAAAATGTGAGAGAGAATTCAGCTTCAAATCAATTGAAACATCTCCAGGAGGAACTCCTTTTAAAAACACTAGCACTGAAAATTAAGTTAGGAGGTGTTAGTGAGGGAATTCCTTATATAAAGGAAAGGCTGCATACAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAATTTGGAACAACTGCATGCTTTGGCTGGAGGACGTGATTGGTTCGGCTGTGGAAGCAGAGTTATCATTACCACTCGTAACAAACACTTACTAACCAATCATGAGATAGAAATTATCCATGAAGTAAAAGGGATGTCTACGGAAAATGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATTACAAAGTTCCTTCAAGTTATGAAGAGATTTTTAACCATGCAGTTGTGTATGCTTCTGGCCTTCCATTAGCTCTAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTTTTGCAGAATGTGACTCTACATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGACGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTTCTTCAAAGGATGTAGTTTGGCAGAAGTTGAAGAGATACTTCAACGTCATTATGGTTATCGCATAAATAGCCACATTCGAGGGTTGGTTGATAAGTCTCTCATAAAGTGCCACTTGAATGAAGTGACATTACATGACTTGCTAGAGGCCATGGGTAAAGAAATCGTCCGGAAAGAATCACCCAAAGAGCCTGAAAAGCGTAGTCGATTGTGGTGTCGCGATGACATAATTCATATTTTACAGGAAAACAAAGGAACAAGTAAAATTGAGATGATATATCTGAGTTCTCCCTCAACGGATCCCGTAATAGACTGGAATGGAAAGGCCTTCAAGAAGATGACAAATCTCAAAACACTTATTATTGAAAATGTCTCTTTTTCTAAAGATCCCAAGTATCTTCCAAGCAGTTTGAGAGTATTGAAATTGAATGGATGTTCTACAGAGTCTCTATCATCTTGTATTTGCAGCAAGAGGTTTGAGGATATGAAAGTCTTGACATTGGACAATTGTCAATATTTAACCCATATACCCAATGTCTCAGGTCTTCCAAATTTAGAAGAATTCTCGTTTGAAAAATGTAACAATTTAATTGCAATTCACGATTCGATTAGGAACCTAAATAAACTTGAAATCATAAATGCATGTGGATGCAGCAAGCTTGAGAGTTTTCCACCCTTATGGCTGCCCTCTCTGAAGGAATTGGACATCTCTTATTGTAGGAGACTCAAGAGTTTTCCAGAATTATTATGTAAGATGACAAATACAAAAGAGATTGGAATGTGTACAACTTCCACAAGAGAATTGCCATTTTCATTTCAAAATCTCAGCTTATCACTAAAGGGATGTAAAATGCTCAGGTTCTCAAAACATGATGATGTAATGTATTCTACAATGTTTTCAAATGTGGAAGCTCTTCATCTCAATCCTTACTATCTCCCATATGAATGTCTCCAAATAGTTCTCAAGTCGTGTGTTAATGTGAAATATCTAAACTTATCCCTTGGCAAATTCAAAATTCTTCCCGAGTGCCTTAGTGAATGTCACCTTCTGAGGACCCTCCTATTGGATTTCAACAGGCATCTTGAGGAAATTAGAGGGCTTCCACCGAATCTCAAATATCTTGATGCATATCGATGTAAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGCAATTACATGAGGCTGGGTGCACCAAATTTTCTTTCCCAAACGGAACAGAGGGGATTCCAGATTGGTTCGAGCATCAAAGCAGGGGTCAATCAATTTCTTTCTGA 2631 0.3862 MAMQSPSSSSSFSYRFTYQVFLSFRGTDTRDGFTGHLYKALTDKGIHTFIDDRDLQSGDEIKPSLDNAIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPTHIRHQSGSYGEHLTKHGKSFQNNKKNMERLHQWKLALTEAANLSGYHFSSGYEYKFIGDIVKYVSNKISRQPLHVANYPVGLQSRVQQVKALLDKGSDDGVRMLGLYGIGGMGKSTLAKAIYNFIADQFECSCFLENVRENSASNQLKHLQEELLLKTLALKIKLGGVSEGIPYIKERLHTKKILLILDDVDNLEQLHALAGGRDWFGCGSRVIITTRNKHLLTNHEIEIIHEVKGMSTENALELLRWMAFKNYKVPSSYEEIFNHAVVYASGLPLALEVVGSNLFGKSFAECDSTLDKYERIPHEDIQKILKVSFDALDEEQQSVFLDIACFFKGCSLAEVEEILQRHYGYRINSHIRGLVDKSLIKCHLNEVTLHDLLEAMGKEIVRKESPKEPEKRSRLWCRDDIIHILQENKGTSKIEMIYLSSPSTDPVIDWNGKAFKKMTNLKTLIIENVSFSKDPKYLPSSLRVLKLNGCSTESLSSCICSKRFEDMKVLTLDNCQYLTHIPNVSGLPNLEEFSFEKCNNLIAIHDSIRNLNKLEIINACGCSKLESFPPLWLPSLKELDISYCRRLKSFPELLCKMTNTKEIGMCTTSTRELPFSFQNLSLSLKGCKMLRFSKHDDVMYSTMFSNVEALHLNPYYLPYECLQIVLKSCVNVKYLNLSLGKFKILPECLSECHLLRTLLLDFNRHLEEIRGLPPNLKYLDAYRCKSLSSSSRRMLLSQQLHEAGCTKFSFPNGTEGIPDWFEHQSRGQSISF* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1505 876 Gene3D - 183 349 IPR027417 -
Mtr4g1505 876 Gene3D - 15 182 IPR035897 -
Mtr4g1505 876 Pfam TIR domain 18 185 IPR000157 GO:0007165
Mtr4g1505 876 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr4g1505 876 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr4g1505 876 Gene3D Ribonuclease Inhibitor 524 702 IPR032675 -
Mtr4g1505 876 PRINTS Disease resistance protein signature 220 235 - -
Mtr4g1505 876 PRINTS Disease resistance protein signature 295 309 - -
Mtr4g1505 876 PRINTS Disease resistance protein signature 388 402 - -
Mtr4g1505 876 PRINTS Disease resistance protein signature 675 691 - -
Mtr4g1505 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 874 IPR044974 GO:0006952
Mtr4g1505 876 SUPERFAMILY L domain-like 544 862 - -
Mtr4g1505 876 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Mtr4g1505 876 Pfam NB-ARC domain 201 423 IPR002182 GO:0043531
Mtr4g1505 876 Gene3D - 354 437 IPR042197 -
Mtr4g1505 876 PANTHER ARCHAEAL ATPASE 28 874 - -
Mtr4g1505 876 SMART till_3 17 160 IPR000157 GO:0007165
Mtr4g1505 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Mtr4g1505 876 Gene3D Ribonuclease Inhibitor 703 845 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1505 Mtr-Chr4 26667974 26671489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1505 12 809 WRKY Transcription Factor Family AT4G12020 28.857 1.23e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1505 - - mtr:MTR_6g478020 1155.58