Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1504 ATGGCTGAAGCTGTGCTTGAACTTGTCCTTGATAATTTGAGCTCACTCGTTCAGAAGGAGCTTGGCCTACTTCTTGGTTTTGAAAAAGACTTCAAAAGTTTTTCAAGCATGCTCACTACAATCAAAGCTACACTTGAAGATACTGAGGAGAAACAATTTACTAACAAAGCTATCAAGGATTGGTTGCTTAAGCTTAAAGATGCTGCCTACGTCCTTGATGATATCCTGGACGAGTGTGCCACCAAAGCAGTGGAGTTGGAGTACAAAGGATCCAAGGGTGGACTACCCGATAAGGTACAAAGCTCTTGCCTATCTTCTCATGAGATAGAAATTATGCATGAAGTAAAAGGGATGTCTAGGGAAAATGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAGTTATAAAGTTCCTTCAAGTTATGAAGAGATTTTAAACCGTGCAGTCGTGTATGCTTCTGGCCTTCCATTAGCTATAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTATTTCAGAATGTGAGTCTACATTAGATAAGTATCAAAGAATTCCAAACGAAGATATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGACGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTTCTTCAAAGGATGTATATTGGCAAAAGTCGAAGAGATACTTAAACTTCATTATGGTTATTGCATAAAGAGCCACATTGGAGGATTGGTTGATAAGTCTCTCATAAAAATTAGTGAATGTTACACTTTGAATGAAGTGACATTACATGACTTGCTAGAGGTCATGGGTAAAGAAATTGTCCGGAAAGAATCACCTAAAGAGCCTGAAAAGCGTAGTCGGTTGTGGTGTCGTGGTGACATAATTCAAATTTTACAGGAAAACAAAGGAACAAGTAAAATTGAGATGATATATCTGAATTCTCCCTCAATGGATCTGGTAATAGACTGGAATGGAAAGGCTTTCAAGAAGATGACAAATCTCAAAACACTTATTATTAAAAATGTCTCTTTTACTAAAGATCCCAAGTATCTTCCAAGCAGTTTGAGAGTATTGAAATTGAATGGATGTTCTACAGAGTCTCTATCATCTTGTATTGGCAGCAAGGAAGCTTGA 1131 0.3731 MAEAVLELVLDNLSSLVQKELGLLLGFEKDFKSFSSMLTTIKATLEDTEEKQFTNKAIKDWLLKLKDAAYVLDDILDECATKAVELEYKGSKGGLPDKVQSSCLSSHEIEIMHEVKGMSRENALELLRWMAFKSYKVPSSYEEILNRAVVYASGLPLAIEVVGSNLFGKSISECESTLDKYQRIPNEDIQKILKVSFDALDEEQQSVFLDIACFFKGCILAKVEEILKLHYGYCIKSHIGGLVDKSLIKISECYTLNEVTLHDLLEVMGKEIVRKESPKEPEKRSRLWCRGDIIQILQENKGTSKIEMIYLNSPSMDLVIDWNGKAFKKMTNLKTLIIKNVSFTKDPKYLPSSLRVLKLNGCSTESLSSCIGSKEA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1504 376 PANTHER ARCHAEAL ATPASE 102 374 - -
Mtr4g1504 376 SUPERFAMILY L domain-like 305 372 - -
Mtr4g1504 376 SUPERFAMILY "Winged helix" DNA-binding domain 188 297 IPR036390 -
Mtr4g1504 376 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 102 374 IPR044974 GO:0006952
Mtr4g1504 376 CDD RX-CC_like 2 91 IPR038005 -
Mtr4g1504 376 Gene3D Ribonuclease Inhibitor 228 374 IPR032675 -
Mtr4g1504 376 PRINTS Disease resistance protein signature 62 76 - -
Mtr4g1504 376 PRINTS Disease resistance protein signature 152 166 - -
Mtr4g1504 376 PRINTS Disease resistance protein signature 328 344 - -
Mtr4g1504 376 Gene3D - 5 116 - -
Mtr4g1504 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 211 IPR027417 -
Mtr4g1504 376 Gene3D - 117 201 IPR042197 -
Mtr4g1504 376 Pfam NB-ARC domain 43 199 IPR002182 GO:0043531
Mtr4g1504 376 Pfam Rx N-terminal domain 5 87 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1504 Mtr-Chr4 26659124 26660694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1504 108 357 WRKY Transcription Factor Family AT4G12020 32.824 3.71e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1504 - - mtr:MTR_4g051688 686.411