Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1503 ATGGCTATGCAATCACCTTCCTCATGCTCTTCATTTTCCTATCGATTCACTTACCAAGTGTTCCTCAGCTTCAGGGGCAGTGACACTCGTAACGGTTTTACTGGTCATCTCTACAAGGCTCTTACTGACAAAGGAATCCACACCTTCATTGATGACCGTGACCTGCAAAGAGGGGATGAAATCAAGCCATCACTTGACAATTCCATTGAAGAGTCTAGGATCTTCATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGACTTGTTTTGCCTGTTTTCTATGGCGTGGATCCTACTCACATACGACATCAAAGTGGGAGTTACGGTGAACATCTCACTAAGCACGGAAAGAGTTTCCAAAATAACAAGAAAAACATGGAGCGGTTGCATCAATGGAAGTTAGCTCTGACTGAAGCTGCTAACTTGTCCGGCTACCATTTTAGTCCTGGATATGAATACAAGTTTATTGGAAAGATAGTCAAATATGTCTCCAACAAGATCAGTCGTCAGCCCTTACATGCTGCCAGTTACCCTGTTGGGTTGCAGTCTCGAGTACAACAAGTGAAATCGCTTCTTGATAAAGGATCTGATGGTGGAGTCCGCATGATAGGACTTTATGGTATTGGAGGCATGGGAAAATCAACACTTGCAAAATCAATTAATAATTGTATTGCTGATCAATTTGAATGCTCATGTTTTCTTGAAAATGTGAGAGAAAATTCATCTTCAAATCAATTGAAACATCTCCAGGAGGAACTCCTTTTAAAAACACTTTCACTGAAAATTAAGTTAGGAGGTGTTAGTGAGGGAATTCCTTATATAAAGGAAAGGCTACATACAAAGAAGATTCTTTTGATTCTCGATGATGTGGACAATTTGGAACCACTGCATGCTTTGGCTGGAGGACGTGATTGGTTCGGTTGTGGAAGCAGAGTTATCATTACCACTCGTAACAAACACTTACTAAGCAATCATGAGATAGAAATTATGCATGAAGTAAAAGGGATGTCTACGGAAAATGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAATTTACAAAGTTCCTTCAAGTTATGAAGAGATTTTAAACCGTGCAGTTGCGTATGCTTCTGGCCTTCCATTAGCTATAGAAGTCGTGGGTTCCAACTTGTTTGGAAAGAGTATTGCAGAATGTGAATCTACATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCAAAAGATACTTAAAGTAAGTTTTGATGCTTTGGACGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTTGTTCAAAGGATGTAGATTGGCAGAAGTCGAAGAGATACTTCAAAGTCATTATGGTTATTGCATAAAGAGCCACATTCGAGGGTTGGTTGATAAGTCTCTCATAAAGAGCAACTTTAATAAAGTGACATTACATGACTTGCTAGAGGTCATGGGTAAAGAAATCGTCCGGAAAGAATCACCTAAACAGCGTGAAAAGCGTAGTAGGTTGTGGTGTCGCAATGACATAGTTCATATTTTACAGGAAAACAAAGGAACAAGTAAAATTGAGATGATATATCTGAATTCTCCCTCAATGGATCTGGTAATAGACTGGAATGGAAAGGCCTTCAAGAAGATGACAAATCTCAAAACACTTATTATTGAAAATGTCTCTTTTTCTAAAGATCCCAAGTATCTTCCATGCAGTTTGAGAGTATTGAAATTGAATGGATGTTCTTCAGAGTCTCTATCATCTATTATTTTCTGCAAGAGGTTTGAGGATATGAAAGTCTTGACATTGGACAATTGTCAATATTTAACCCATATACCCAATGTCTCAGGTCTTCCTAATTTAGAAAAATTCTCGTTTCAATTTTGTAGGAATTTAATTGCAATTCACGATTCGATTGGGAACCTAAATAAACTTGAAATCATAAATGCATGGGGATGCAGGAAGCTTGAGAGTTTTCCACCCTTATGGCTGCCCTCTCTTAAGGAATTGGACGTCTCTTATTGTAAGAGACTCAAGTGTTTTCCAGAACTATTATGTAAGATGACAAATACAAAAGAGATTGGAATGTGTATAACTTCCACAAGAGAATTGCCATTTTCATTTCAAAATCTCCACTTATCATTATTGGCATGTAAAATGCTCAGGTTCCCAAAACATAATGAGAAAATGTATTCTATAATGTTTTCAAATGTGGAAACTCTTCATCTCGATGCTTACTATCTCCCATATGAATGTCTCCAAATAGTTCTCAAGTCGTGTGTTAATGTGAAATTTCTAAGCTTATCCCGTTGCAATTTCAAAATTCTTCCCGAGTACCTTAATGAATGTCACCTTATGAGGACCCTCGTATTGAATTTCAACGACCATCTAGAGGAAATTAGAGGGTTTCCACCGAATCTCAAATATCTTGAAGCAATAGGATGTAAATCATTGAGTTCCTCAAGTAGAAGAATGTTATTGAGTCAGCAATTACATGAGGCTGGGTGCACCAATATTTGTTTCCCAAACGGAACAGAGGGGATTAGGATTCCAGATTGGTTCGAGCATCAAAGCAGGGGTCAATCAATTTCTTTCTGGTTCCGTAAAAAGATCCCTTCTATAACTTCTATTATTATTCTTCCGGATGTTCAATATATTTCTTTCAGATTTAATTTTTTTGTCAATGGTTATGAATGTACAGTTCCAAAACACGAATTTAAATTGCCGTATTTTTTGGGACATACATATTTGTTTGATATGAATTTGGAAGAAAATATTGAACTCTGTAATATAGTTCACATAGCACTTTTAAAAAATGAATGGATCTATGTGGAGTTTAAGGTTCAGTTTAGTAGGATGCCTGCGGATGTGGTTCAAAGGTTAAGAAGTACAGAAATGGGAATCCACGTGTTGAAGGAGAAAAACAACACGAATGAGGATGTGATATTCATTAATCCTTATAGTAGAAAGAGAAAATTAGATGAATATCTCAATGCTTCATTATCACAATTTCATCCTTCGCTGAAAAAGCATAGATTTGTGGAAGTGGGAGTTTCAGAGACAGAAATTTTGCAGCAGCAACATCTAGCTTTAGTGTCAGGCATGCGGAACTTGGTGCTTACTGAAACAATAGAAAAGGAACACCATGGCTAG 3192 0.3725 MAMQSPSSCSSFSYRFTYQVFLSFRGSDTRNGFTGHLYKALTDKGIHTFIDDRDLQRGDEIKPSLDNSIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPTHIRHQSGSYGEHLTKHGKSFQNNKKNMERLHQWKLALTEAANLSGYHFSPGYEYKFIGKIVKYVSNKISRQPLHAASYPVGLQSRVQQVKSLLDKGSDGGVRMIGLYGIGGMGKSTLAKSINNCIADQFECSCFLENVRENSSSNQLKHLQEELLLKTLSLKIKLGGVSEGIPYIKERLHTKKILLILDDVDNLEPLHALAGGRDWFGCGSRVIITTRNKHLLSNHEIEIMHEVKGMSTENALELLRWMAFKIYKVPSSYEEILNRAVAYASGLPLAIEVVGSNLFGKSIAECESTLDKYERIPHEDIQKILKVSFDALDEEQQSVFLDIACLFKGCRLAEVEEILQSHYGYCIKSHIRGLVDKSLIKSNFNKVTLHDLLEVMGKEIVRKESPKQREKRSRLWCRNDIVHILQENKGTSKIEMIYLNSPSMDLVIDWNGKAFKKMTNLKTLIIENVSFSKDPKYLPCSLRVLKLNGCSSESLSSIIFCKRFEDMKVLTLDNCQYLTHIPNVSGLPNLEKFSFQFCRNLIAIHDSIGNLNKLEIINAWGCRKLESFPPLWLPSLKELDVSYCKRLKCFPELLCKMTNTKEIGMCITSTRELPFSFQNLHLSLLACKMLRFPKHNEKMYSIMFSNVETLHLDAYYLPYECLQIVLKSCVNVKFLSLSRCNFKILPEYLNECHLMRTLVLNFNDHLEEIRGFPPNLKYLEAIGCKSLSSSSRRMLLSQQLHEAGCTNICFPNGTEGIRIPDWFEHQSRGQSISFWFRKKIPSITSIIILPDVQYISFRFNFFVNGYECTVPKHEFKLPYFLGHTYLFDMNLEENIELCNIVHIALLKNEWIYVEFKVQFSRMPADVVQRLRSTEMGIHVLKEKNNTNEDVIFINPYSRKRKLDEYLNASLSQFHPSLKKHRFVEVGVSETEILQQQHLALVSGMRNLVLTETIEKEHHG* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1503 1063 Pfam NB-ARC domain 201 428 IPR002182 GO:0043531
Mtr4g1503 1063 Gene3D - 15 182 IPR035897 -
Mtr4g1503 1063 Pfam TIR domain 18 185 IPR000157 GO:0007165
Mtr4g1503 1063 Gene3D Ribonuclease Inhibitor 509 869 IPR032675 -
Mtr4g1503 1063 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr4g1503 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 962 IPR044974 GO:0006952
Mtr4g1503 1063 SUPERFAMILY L domain-like 518 856 - -
Mtr4g1503 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 447 IPR027417 -
Mtr4g1503 1063 PRINTS Disease resistance protein signature 220 235 - -
Mtr4g1503 1063 PRINTS Disease resistance protein signature 295 309 - -
Mtr4g1503 1063 PRINTS Disease resistance protein signature 388 402 - -
Mtr4g1503 1063 PRINTS Disease resistance protein signature 675 691 - -
Mtr4g1503 1063 SMART till_3 17 160 IPR000157 GO:0007165
Mtr4g1503 1063 Gene3D - 354 437 IPR042197 -
Mtr4g1503 1063 Gene3D - 183 348 IPR027417 -
Mtr4g1503 1063 PANTHER ARCHAEAL ATPASE 28 962 - -
Mtr4g1503 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1503 Mtr-Chr4 26622449 26651711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1503 12 794 WRKY Transcription Factor Family AT4G12020 28.605 3.14e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1503 - - mtr:MTR_4g051682 1338.55