Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1501 ATGGAATCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGAGCTTTTGGTGCTGCTATTCTTGTTAATCATAAAGCTGAGAAGAAAAAGTATGTGTTGAAAAAAATCAGGCTTGCTAGACAGACTGAAAGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCAAGAATCAGGCACCCTTACATTGTTGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAACTGATGAAAAAATCAAACGGTGCTTATTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGCTGGCAGTAGAGTATCTTCATTCAAACTATGTTTTACATCGCGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCAAGATATTCGCCTCGGTGATTTTGGACTTGCTAAGACACTAAAACAAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCGAATTACATGTGTCCTGAACTGCTTGCAGATATTCCGTATGGATTCAAATCTGATATTTGGTCATTAGGCTGCTGTGTATACGAGATGGCTGCTCATCGTCCTGCCTTTAAAGCGTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCCTCTATTGGACCTTTACCTCCATGTTATTCTCCTTCGTTGAAAATACTAATAAAAGGCATGTTGAGAAAAAGTCCCGAGCATCGACCAACAGCATCTGAGGTGTTGAAGCATCCTTATTTGCAACCTTACGTCGATCAATACCGTCCATCTTTCGCTCCTCTAACAGCCTTTTCTCCTGAAAAACCGATTTCTTCTGCCACTTATACTAAAAGACATATGGCTGAAAGTCAGAACAGTACTAGTTCAAGTAGTGACAAAGACAGTTTACTGTCAAATGAGAGAAATATTGAAACAACAGCGCCGAAGTGTGATAACAAAGCCACTGAGATGGATATTGCATTGATCGATGATGATGGCTCCGAGCAAGAGGTGATAAAATCATCTCAAAATGAACAGCATTCTAATGTTGAATCTAAACAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAAGAAGGGAAAGGTAGAGAAGCAACTTCTCCGATGAGAGGCAGTCGTCTAAAGGCTGGTGGAGTATCAGCGCAGAAAGTAAATACAGACATATCATCTAAATTACCTAAACCTACTTTCATTGCTCCGAGTTTGAAGCCTAATTTTGAGTCGCCGACTGTTCCACTTGTAAAGGCATCCCCTGATTCTTCAAAACGGATATATGGATCACATCAGTCAAAACTACAGTTACTGATGACCGAGCCCTCACCGAAAGTTAAACCGAAACATGATATGACTCCACCATCTGCTTCTATCAAACAAGTAGAAGGGGATGGAGTTCCTCCTAGGCCAAGACAAAGAACTCCTCCAAGCTTACTTCGGCGGCCTACTTTTCCAGGACGAATGAGGCTGGCAGGGTTTGATGTTCCAAATGCAGCGAACGATAGCGGGAAGCTAGGTCCAAGTAATACAGACCAGGAATCTGAGATGAGCCATTGTCATTTGTTCAATGGAAATGTACCGCGTATTTCTAGACCAATTACTAGAGAACCTCACAAGGCTTTTGAAAGAAATTCTAAAGCAATGCAAACAGAGAGTAGTAATTCTGCCTCGTCTTCGGTTTCTATTCAGGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACATGAGAGAACATATACTTCCTGATCATGACAATGTAACAAAAAGTGTCGGTGTAGACTCACGTCCTGACAGTAGTCCGTCGACAACCTGTTCGCGTTGTACGATGGCTGAAGAAGCGTCAGAGGAAACCTCTGAAGTCACCCTGAATTTTCAGAATACTATTAGTAATGATGAAAAAGTGAGTTCAAATTTAACACTTGATCAGCCTGTTGAAAATTCTAAGAAAATGTTTGCTTCCGAAGATAGTCTTCCGAGAAATCAGACAACTGTATCTACTGCTTCTATATGTGATGATAGATCAGTTGATATACCTACTGCTTCTATGTGTGATAATAGATATGTTGATACATCTACCGAAGTGGCCGAAGAAATCGAAGGTCTTCGAGATACTTCTAATGAAATGGCTTTAACCAAGTCTCTTAAACATCCACACTCAGTTTCTGGAGAAAAGTCTATTTGTGAAGAAGTTGGTTCGGTAAACAAACTCAATAATAGACCTGAAACTGTCACCGATGATGACAAATTCACGGTGAAGGAGCGATTGTCATTGGTCTCTGAAACTGCTCCTGTAATTACCTCTACCAAAGCATCGAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTAACGCAGAATCCAGCACAAGAAAGGCCAGATACTAGTCATCTTCCTGCAGCCTTTGATGACGTGATCCATGTTATACGCCATAGTAGTTACCGCGTTGGGAGTGATCAGCCGGTAATGGAATCGGTTGAAATGGGAGTTCAGAATGTCGATGTTGGCAAGTTTATCAATGTTATGAGGGATGACATAGAAATGAGAAACACAAACCCTCAAATGACTCTTAAATCTTCGAATTCCTCTGAAGCTGAAACCTTGAAATCTAATATATCTGATCAGTTGGAGATGAGAAATACAAGCACAAGCACCCCTCCTACACTTAAATCCTCAAGTTTCTCCGATGCTGCAAGCTTGAAATCATCGAGCATTTCTGAAAATCCTCAAGATGTGAGTAACACTGTTTCTTTAGTTTCGGAATCTGATTCATCTGAGCACAGTAAATGCAACATGCCTACAACCAAAGACAAACCACCGGAAAAGGAAATACTTGACGTGAAATCATTCAGGCAGAGAGCAGAAGCACTTGAAGAGCTCTTGGAATTGTCTGCAGAGTTGCTGCAACATAATCGATTGGAGGAACTTCAAGTTGTACTAAAGCCATTTGGAAAAGATAAGGTCTCCCCAAGGGAGACGGCGATTTGGTTAGCAAGGAGTCTTAAGGGAATGATGTCCGAGGAAAATGGAGGACGTTGTTCATCATGA 3090 0.4123 MESKMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIRHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKQDDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFAPLTAFSPEKPISSATYTKRHMAESQNSTSSSSDKDSLLSNERNIETTAPKCDNKATEMDIALIDDDGSEQEVIKSSQNEQHSNVESKQPKTIRNIMMALKEGKGREATSPMRGSRLKAGGVSAQKVNTDISSKLPKPTFIAPSLKPNFESPTVPLVKASPDSSKRIYGSHQSKLQLLMTEPSPKVKPKHDMTPPSASIKQVEGDGVPPRPRQRTPPSLLRRPTFPGRMRLAGFDVPNAANDSGKLGPSNTDQESEMSHCHLFNGNVPRISRPITREPHKAFERNSKAMQTESSNSASSSVSIQGCELADDATTFIDMREHILPDHDNVTKSVGVDSRPDSSPSTTCSRCTMAEEASEETSEVTLNFQNTISNDEKVSSNLTLDQPVENSKKMFASEDSLPRNQTTVSTASICDDRSVDIPTASMCDNRYVDTSTEVAEEIEGLRDTSNEMALTKSLKHPHSVSGEKSICEEVGSVNKLNNRPETVTDDDKFTVKERLSLVSETAPVITSTKASSQKVLQEKGTVTQNPAQERPDTSHLPAAFDDVIHVIRHSSYRVGSDQPVMESVEMGVQNVDVGKFINVMRDDIEMRNTNPQMTLKSSNSSEAETLKSNISDQLEMRNTSTSTPPTLKSSSFSDAASLKSSSISENPQDVSNTVSLVSESDSSEHSKCNMPTTKDKPPEKEILDVKSFRQRAEALEELLELSAELLQHNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEENGGRCSS* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1501 1029 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 863 954 - -
Mtr4g1501 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 341 362 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 452 529 - -
Mtr4g1501 1029 SUPERFAMILY Protein kinase-like (PK-like) 5 312 IPR011009 -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 863 943 - -
Mtr4g1501 1029 CDD STKc_Nek 7 262 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 601 621 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 377 398 - -
Mtr4g1501 1029 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Mtr4g1501 1029 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1501 1029 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1501 1029 Gene3D Transferase(Phosphotransferase) domain 1 90 340 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 293 312 - -
Mtr4g1501 1029 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1011 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 347 362 - -
Mtr4g1501 1029 Coils Coil 967 987 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 785 807 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 785 810 - -
Mtr4g1501 1029 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Mtr4g1501 1029 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1011 - -
Mtr4g1501 1029 MobiDBLite consensus disorder prediction 607 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1501 Mtr-Chr4 26612765 26620328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1501 12 273 MAP Kinase Kinase Kinase AT3G06030 32.374 5.68e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mtr4g1501 Pkinase 6.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1501 K08857 - gmx:100818747 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1501 4 26612765 26620328 Mtr4g1501 4 26612765 26620328 ECH
Mtr2g2912 2 42702313 42709908 Mtr4g1501 4 26612765 26620328 PCT