Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1496 ATGGTAGTTTTTCAAATTGAAGTTTTCATCTTTTTGTTATTTTTCTTTATGATTTCAATGTCTTATGGTGAAACCAACCCAAATGATCTCAAAATTCTGAATGATTTCAAAAAAGGGTTGAAGAATTCAGAGCTTCTGAAATGGCCTGAAAATGGTAATGATCCATGTGGTTCACCTTCATGGAATTATGTGTTCTGTTCTAAGGGTAGAGTTACTCAGATTCAAGCTAAAAATCTTGGTCTTAAAGGTTCATTGCCTTCAAATTTTAACCAGCTTTCAGAGCTTCAGAATTTAGGTCTTCAAAGAAATAATCTTAGTGGAATGTTACCTAGTTTTAGTGGATTATCCAATTTGCAATATGCTTTTTTGGATTACAATGAATTTGATGCAATCCCTGTTGATTTCTTCAATGGACTTGATAATATTCAGGTTTTGTCTTTGGAAGAAAACCCTTTGAATGCTACTAATGGTTGGTTATTTCCATTGGACTTGAAAAATTCAGCTCAATTAACAAATCTTTCTTTGGTGAATTGTAATTTGGTTGGTCCATTACCTGAGTTTCTAGGCACATTGTCTTCTTTGTCAAATTTGAGGCTTTCAGGTAACAGACTTTCGGGTGAAATTCCGGTTAGTTTCGGTCAATCTTCGATTCAGGTTCTGTGGTTGAATGATCAACAAGGTGCTGGAATGACAGGTTCTATTGATGTTATTGCTTCAATGACATATTTGAGACAGGTTTGGTTACATGGAAACAAGTTCAGCGGAACAATTCCATCGAATATTGGAAATTTGACTGCACTGCAAGAGCTTAACCTCAATGGTAATAAACTTGTAGGTTTGATTCCATATTCATTGGCAAATATGGATCTTAAGTTACTTGTGTTAAATAATAATATGTTTATGGGTCCAATACCAAAGTTTAAGGCTGCAAAAGTATCTTATGATTCTAATTCCTTTTGTCAAACTAAACCTGGTCTTGATTGTGCTTCTAATGTTAATGTTCTATTGGATTTTCTTCGTAATCTGAATTATCCATCATTTCTTGTTACTCAATGGGTTGGTAATGATCCTTGTGGAGAACCATGGTTTGGGTTGAGCTGCGGTAACTCGAAGGTATCTAGAATCAATTTGCCCGGACGAAAGCTTAATGGTACATTGAGTCCTTCACTTGCTATGTTAGATTCATTACTTACAATTAGGCTTGCAGGAAACAATATAAGTGGTAAAGTTCCTAGTAATTTTACGGAATTGAAATCATTGAGTTTGTTGGATTTGAGTGATAACAATTTGGAACCTCCATTGCCGAATTTTCGTGATGGTGTGAAGGTTATTATTGATGGTAACCCTCTTTTTGATAACCAAACTCGAAGAAGTCCGGTTCCTGTTAAAAGTCCATCACCTGTAAGTGAACCACCTTCACCACACAACGTGCGGCCATATCTGACGCCACCGCCATCGCCATCACCATCTGTCGTTATTCCACCTTCCCCTAGGCAAAGTTCAAGCTCCAATCAGTCTAGGAATGGCGAATCAAATACTCAACAGAGTAACTCGAATAAATTCAAAACAGTAGCAATCGTGGCTGGAGCTGCAGTTTTTGCATTTGTAGCTGCATTGGTTATTTATCTCTTTATATGCTGTTGTGCGAAGAAGAAGAATAAAAAACACTCATTGGATGGTTCTAGCTCTATCGTGGCTCAAAGTCAAGATGGATCCGATCCAAAAGTGATGGTTAAATTAGCAGTGTCGGATAGCACCAACGGGAGCTTATCGACAAAGACAGGAATAAGCTCTCTGACTAACAATAGTGGTGAAACCGAAAGCTATCATGTATTTGAATCCGGTAACCTAGTTATCTCAGTACAAGTTCTGCGCAGGGTCACCAACAATTTCGCTTCGGAAAATGAGTTGGGCCGTGGTGGATTTGGAACGGTTTACAAAGGTGAACTTGAGGATGGAACAAAAATAGCAGTGAAAAGAATGGAATGTGGAGCTATTGGAAGCAAAGGAATCGACGAGTTTCAAGCGGAAATAGCCGTTCTTTCGAAGGTTCGGCACCGACATTTGGTATCCTTGTTAGGCTATTCTATTGAAGGAAATGAGAGGCTTTTGGTTTATGAATACATGCCTCTTGGTGCTCTAAGTAGACATCTTTTCCATTGGAAAAGCTTGAATTTGGTCCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCCCTTGATGTTGCTAGAGGAATAGAATACCTTCACACTCTTGCACGACAGACGTTCATCCATCGAGACCTCAAGTCTTCTAATATTTTACTTGGAGATGATACTCGAGCTAAAGTTGCTGATTTTGGTTTGGTGAAACTTGCACCGGATGGTGAAAAGTCTATGGCAACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTAATGGGAAAAATCACGACTAAAGTGGATGTGTTCAGCTACGGCGTCGTATTGATGGAACTCCTAACCGGATTAATGGCTCTTGACGAAAGCCGACCAGAGGAAAACCGTTACTTAGCCGAATGGTTTTGGCAAATAAAATCGAACAAAGAAAAACTGATGGCTGCAGTCGATCCAACACTTGAAGTAAACGAAGAGACTTTCGAGAGTATTTCAATTGTAGCTGAACTTGCCGGACATTGCACTGCTAGGGAGGCAAACCATAGGCCAGATATGGGACATCCAGTCAAAGTGCTGTCAGAGTTAGTCGAGAAATGGCGACCAGTTGATGAAGAATTCGATTATGCCGGTGGCATTGACTTCGGTCAACCACTTCCGCAAATGTTGAAAATTTGGAAGGAAGCAGAAGGGAAAGGTACAAGCTATACAAGTCTTGAAAATAGTAAAGGAAGTATACCAGCTAAACCTTCTGGTTTTGCAGATTCATTTACTTCTGCTGATGCTAGATGA 2934 0.393 MVVFQIEVFIFLLFFFMISMSYGETNPNDLKILNDFKKGLKNSELLKWPENGNDPCGSPSWNYVFCSKGRVTQIQAKNLGLKGSLPSNFNQLSELQNLGLQRNNLSGMLPSFSGLSNLQYAFLDYNEFDAIPVDFFNGLDNIQVLSLEENPLNATNGWLFPLDLKNSAQLTNLSLVNCNLVGPLPEFLGTLSSLSNLRLSGNRLSGEIPVSFGQSSIQVLWLNDQQGAGMTGSIDVIASMTYLRQVWLHGNKFSGTIPSNIGNLTALQELNLNGNKLVGLIPYSLANMDLKLLVLNNNMFMGPIPKFKAAKVSYDSNSFCQTKPGLDCASNVNVLLDFLRNLNYPSFLVTQWVGNDPCGEPWFGLSCGNSKVSRINLPGRKLNGTLSPSLAMLDSLLTIRLAGNNISGKVPSNFTELKSLSLLDLSDNNLEPPLPNFRDGVKVIIDGNPLFDNQTRRSPVPVKSPSPVSEPPSPHNVRPYLTPPPSPSPSVVIPPSPRQSSSSNQSRNGESNTQQSNSNKFKTVAIVAGAAVFAFVAALVIYLFICCCAKKKNKKHSLDGSSSIVAQSQDGSDPKVMVKLAVSDSTNGSLSTKTGISSLTNNSGETESYHVFESGNLVISVQVLRRVTNNFASENELGRGGFGTVYKGELEDGTKIAVKRMECGAIGSKGIDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWKSLNLVPLSWSQRLAIALDVARGIEYLHTLARQTFIHRDLKSSNILLGDDTRAKVADFGLVKLAPDGEKSMATRLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEENRYLAEWFWQIKSNKEKLMAAVDPTLEVNEETFESISIVAELAGHCTAREANHRPDMGHPVKVLSELVEKWRPVDEEFDYAGGIDFGQPLPQMLKIWKEAEGKGTSYTSLENSKGSIPAKPSGFADSFTSADAR* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1496 977 Gene3D Phosphorylase Kinase; domain 1 592 708 - -
Mtr4g1496 977 Pfam Protein tyrosine and serine/threonine kinase 634 902 IPR001245 GO:0004672|GO:0006468
Mtr4g1496 977 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mtr4g1496 977 Pfam Leucine rich repeat N-terminal domain 332 367 IPR013210 -
Mtr4g1496 977 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Mtr4g1496 977 MobiDBLite consensus disorder prediction 464 494 - -
Mtr4g1496 977 SUPERFAMILY L domain-like 330 436 - -
Mtr4g1496 977 Gene3D Transferase(Phosphotransferase) domain 1 709 922 - -
Mtr4g1496 977 PANTHER OSJNBA0070M12.3 PROTEIN 6 977 - -
Mtr4g1496 977 SMART LRR_typ_2 191 215 IPR003591 -
Mtr4g1496 977 SMART LRR_typ_2 264 287 IPR003591 -
Mtr4g1496 977 SMART LRR_typ_2 417 439 IPR003591 -
Mtr4g1496 977 SMART LRR_typ_2 92 114 IPR003591 -
Mtr4g1496 977 SMART LRR_typ_2 115 138 IPR003591 -
Mtr4g1496 977 MobiDBLite consensus disorder prediction 950 977 - -
Mtr4g1496 977 SUPERFAMILY Protein kinase-like (PK-like) 605 905 IPR011009 -
Mtr4g1496 977 ProSiteProfiles Protein kinase domain profile. 631 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1496 977 PANTHER OSJNBA0070M12.3 PROTEIN 6 977 - -
Mtr4g1496 977 CDD STKc_IRAK 637 910 - -
Mtr4g1496 977 SUPERFAMILY L domain-like 26 307 - -
Mtr4g1496 977 MobiDBLite consensus disorder prediction 495 517 - -
Mtr4g1496 977 Gene3D Ribonuclease Inhibitor 330 453 IPR032675 -
Mtr4g1496 977 MobiDBLite consensus disorder prediction 449 517 - -
Mtr4g1496 977 Gene3D Ribonuclease Inhibitor 27 326 IPR032675 -
Mtr4g1496 977 SMART serkin_6 631 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1496 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1496 Mtr-Chr4 26550672 26554539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1496 83 919 Receptor kinase-like Gene Family AT1G55610 30.337 2.90e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mtr4g1496 PK_Tyr_Ser-Thr 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1496 - - cam:101505581 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1496 4 26550672 26554539 Mtr4g1496 4 26550672 26554539 ECH