Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1494 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTTTGTGCTAGGAATCAATGGTCTTATGCTGTTTTTTGGAAGATCGGTTGCAATAATTCAAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCTTTGCCATCAACTTTCCTTCCGCAAAATGTTGGAACGTCTAATTTGCCTTACCAAGACAGGGAAGGGTGCTGGTTTTCTTCCGATTCTCAGCTAAGGATTCAAGAGGACGATAGAGTCTGCTCATTGATTAACAAAATGATGGTGAATAATTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGGGCTGCATTCACAGGAAATCATCAATGGATTCTTTTGAACAATTTCATCAAAGACGTATATCCACCAGAGGTATTAAATGAGGTGCATTGCCAATTTTCAGCTGGAATGCAGACAGTGGTGGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATCGGATTTGTCAATGATGTGAAGAACTTGATCTTTCAATTGGGACATGTTCCCGGTGCACTTCTATCCGAAGACTATTCAACAAGACTTTCAAGTGAAAGACACACCGGATCTGTGACTGATTCTGTTCCTGTGTCTTCTAATCCACACGTCATTACCTCAAACTGCGTTCCCTTAGTAGCTAATGGATCGAACCAACCAAGTAATTCATTGAATAGTACAATGCCTGTTCTAAGGGGAGAAATAAATAGTTACCATAGTTCTGTATGGACACCTCAATCCCAAAACCTAAACCAGATATTTGATAGCATTTGCCAACCAAAGGCTCAACGAGAGAATACAACTGTGAAGGCTGAAGCTGAAGTCATACCTGCAAGTCTTGATTCTTCATGTCTGCAACGGCGTTCTGTTTCATATAACGCAAGATCTGCATTCAATGAATTAACTGATTCCAATCTGAATGGTTTCGGTCTTAAACAAATGGAGCAACAAGTCTTATCAGGTATTGGGAGGCAAAGTCACGGTAACCCTAATATGAATCCATCATCAAGTGTCTTCAATATGTCTCAACCGAAAACCGATGGTGGTAAAATTTATTATCAGAATTCTAACAACACTTCACTTCTTGGAGGAATCCCAATTTGTAGTAGTGGGATGAATAGTAATATTTTAAGGACAAATATGATTAACTGCTCAGTTTCAAACCTTCCTGAATTATCCACTACCGATTTTTCTGGAAAACAAAAAGTAGGGTTTGGAATTCAAAACAATAATTCAACTAAAGCTGCCAATCACATGCATCTAGAAGGCTCTTATCAGAAGAATCTTCCAGTTGATTTAAAGCATGATCAAGATGCTTTGGCTACCTCGGATCAAAGGATAGATGATTTGCTTCAGTCCCTGAAGATTCCATCACCGTCTCTTTATCGTGAGGAGCATGTGTCTATGAATGATCACATCCCTGATTTTCTTCGTGATTGCCTCGATAAAGATGTTACTAACCAACACATGAAGACAAATTTTGAACACGGAGAAGCTTGTACGCAACTTTCATCGGGTGATGATGACTTGTTTGATGTCTTGGGCATGGACTTCAAAATGAAACTGCTGAATGGAAACTGGAATACATTGTTTGCGGATGAATTGGATGGCAATGCAGAAACACTGGATAAAAAGGCAATGTCTACGAATTTTCCGATTGTAGGTCACGATAATATTTATCCGGTTAATGAAGCAATATCAGGCAATGGCATCTTCTCAGGAACAAAATCTGATCACCTCTTAGATGCCGTGGTCTCGACGACTCAATCTGTTTCCAATCAGAATTCTGATGAAACGTCGTGCAGGACCACAGTAACAAGGATTAGTACCGCATCTGTACCATCTACCAGCATGCAAATTATGCGCGATCATGTTAGTCAGGGGGGGTTGTTTGATTTTCCCAAGACGGAGGTCAAAACAAGCCCTGCGGAAACAAGTTCTATTAGATCTGGCTGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCAATATATGGTTCTCAACTTAGTTCATGGGTGGAGAGTGGTAGCAGCAATGTGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGACCAGAAGAAGTTTCCAAATCAAACCGTAAAAGGCTTAAACCTGGAGAGAACCCAAGGCCTCGACCCAAAGATCGCCAAATGATTCAAGATCGCGTGAAAGAGTTACGTGAAATTGTGCCTAATGGAGCAAAGTGTAGCATAGACGCTCTTCTTGAAAGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGATAAGCTGAAACAGACGGGGGAATCCAAGATTGTTAGTAAAGAAGGTGGATTGTTGTTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTTAATCATCCCCGTCAGATGCTAGTCGAGATGCTTTGTGAGGAAAGGGGTTTCTTTCTGGAAATAGCCGACTTAATCAGAGGATTAGGGTTAACCATCTTGAAAGGGGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAGCAAACAGCAAAGGGAGGCGCAGCTTCATCAAATGCTCCAGTTGATAACATGATGGTTTATCATTCTATCCCACAACCCACCTAG 2766 0.4103 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSTFLPQNVGTSNLPYQDREGCWFSSDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWILLNNFIKDVYPPEVLNEVHCQFSAGMQTVVVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGHVPGALLSEDYSTRLSSERHTGSVTDSVPVSSNPHVITSNCVPLVANGSNQPSNSLNSTMPVLRGEINSYHSSVWTPQSQNLNQIFDSICQPKAQRENTTVKAEAEVIPASLDSSCLQRRSVSYNARSAFNELTDSNLNGFGLKQMEQQVLSGIGRQSHGNPNMNPSSSVFNMSQPKTDGGKIYYQNSNNTSLLGGIPICSSGMNSNILRTNMINCSVSNLPELSTTDFSGKQKVGFGIQNNNSTKAANHMHLEGSYQKNLPVDLKHDQDALATSDQRIDDLLQSLKIPSPSLYREEHVSMNDHIPDFLRDCLDKDVTNQHMKTNFEHGEACTQLSSGDDDLFDVLGMDFKMKLLNGNWNTLFADELDGNAETLDKKAMSTNFPIVGHDNIYPVNEAISGNGIFSGTKSDHLLDAVVSTTQSVSNQNSDETSCRTTVTRISTASVPSTSMQIMRDHVSQGGLFDFPKTEVKTSPAETSSIRSGCSKDNVGNCSQTTSIYGSQLSSWVESGSSNVKRENSVSTGYSKRPEEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTAKGGAASSNAPVDNMMVYHSIPQPT* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1494 921 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Mtr4g1494 921 MobiDBLite consensus disorder prediction 710 735 - -
Mtr4g1494 921 CDD bHLH_AtLHW_like 724 793 - -
Mtr4g1494 921 MobiDBLite consensus disorder prediction 690 709 - -
Mtr4g1494 921 MobiDBLite consensus disorder prediction 690 735 - -
Mtr4g1494 921 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 920 IPR043561 GO:0003700|GO:0006355
Mtr4g1494 921 MobiDBLite consensus disorder prediction 646 668 - -
Mtr4g1494 921 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 720 769 IPR011598 GO:0046983
Mtr4g1494 921 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 920 - -
Mtr4g1494 921 MobiDBLite consensus disorder prediction 652 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1494 Mtr-Chr4 26472402 26479409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1494 513 903 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.115 6.69e-116 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1494 - - aprc:113857443 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1494 4 26472402 26479409 Mtr4g1494 4 26472402 26479409 ECH
Mtr2g2925 2 42798749 42805395 Mtr4g1494 4 26472402 26479409 PCT