Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1492 ATGGCAACGTACTTTCATGGCAATAGCAACAGCAACAGTTCTGAAATCCAACCGTCGGTAGAAGGTTTACAGACACTTTACCTTATGAATCCAAACTACGTACCTTACTCTGAGGAGGAACCACAAAATCCAACACAAAACATGCTTTTCGCTAATCCCAACGCTACCACTAACAATAATACTTCTCCCCACGCGCTTCATGGATTCAAGTTTCCCCACGCGCCTTCATCACTCAATCAACACCACTTGCTTGGAGTTACTATTCCACCTTCCAACTTTCATGGATCCAACACTACCGACACTCCTACACAACCATATGAAGTTTCCACTTTCCATCCATTTGCCTCCTCGGCCACCGTGACTCCTCGTCCCCATTATAACATGTGGGGATCAGGTAGCTTTATACCTGATCACACTGTCACAGCAACGACAACTGATAGATCAGAATGTTCAGATGTCGTTGCTGTGACATCATCTACAGAGTTTCGCTCGCAGCAAATTGGTTTTCACAGACCAATTTATCAACGTGGTTTGTCTCTCAGTCTTTCTTCGCAACAAACGCCTTACCGGTCAGCCTCTGGTGAGATTGAGGTATCTCCAGGTAGCCGTGGAGGCGAAGAAGGCGGTGGAGTTTCGACCATGAACGGTGTTGTTTTCGGTTCAAAGTATTTGAAAGTAGCACAAGAGCTTCTTGATGAAGTTGTGAATGTGGATAAGGGAATCATCAAAGGAGAATCTGTGGAAGGAGGTAATAGTAATAACAATAAAGAGAAGAGGAAAGTGAATATTGAATCTAGTTCAAGTGGTGGAAGAGAAAACGATGGAGGGAAACAAGTAGCTGAATTAAGCACTGCACAAAGACAAGAACTTCAAATGAAGAAGTCAAAGCTTGTTAGCATGCTAGATGAGGTAGAGCTAAGGTACAGACAATACCACCATCAAATGCAAAGTGTGATATCATCATTTGAGCAAGCAACAGGATATGGAGCATCAAAATCTTACACATCCCTTGCCTTAAAGACAATCTCAAAGCAATTTCGAAGTCTAAAAGATTCAATCTCTTCACAAATTAAGACGGCTAGCAAGACTTTGGGCGAAGATGATTGCTTGGGTGTTAAGTTAGAAGGTTCTAGGCTTAGGTATGTCGATCACCAACTCCGACAACAGCGAGCACTTCAGCAACTTGGAATGATTCACAGCAATGCTTGGAGGCCTCAGAGAGGCTTGCCTGAACGAGCTGTTTCTGTTCTTCGTGCCTGGCTTTTTGAACATTTCTTGCACCCTTATCCCAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGTAGTCAGGTATCTAACTGGTTTATAAACGCCAGAGTTCGGCTGTGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAAACCAAGGAGCAAGAGGAGAATAATGACTCCAAGGATAACACAAATAAATCAAAAGAATTAGGTGTCACAAAACTTGATCAAATTAATAATCTTCATTCAAAGGCAGAAAACTTCAACAACCAAAACCCTTCTCCAACAGTAATTTCAAGTTCCAATAATTCAATGTCAACATCAACAATGGGAGGAGAAGGAGGGTCCTTTCAATCCAATTCTGGTTTCCATCTTGCAGGATCATCTGATGTACAAAGGAGTCCAAAAAACTCCCATCAAGGTAGTTTCCTTTCAATGGACATGGAAATGAAGTCTAATAGAGAGTCTAACATAGAGGTTGAAGTTGAAAGACATAATCAAGACAAAAATGGTTACCCTTTAATGAGTGGAAATGAAAATCATCATGATGGTGGTTATGGATCATTCTCAATGGAAGATATTAGAAGGTTTAATGTTAGTGAGCAATTAGCTCCTAGGTTCCATGGAAATGGTGTTTCTCTAACTCTTGGACTACCTCATAATGAAAATATCCCTCTCTCTTCAACCCAACATGGATTTCTCTCTCAGAATTTACATTTAGGAGGGACGATTGATGAAATGGGAAGCAATGAGAATGAGTTTTGTACCATCAACACTACTCCTTCTCATTCAGAAACAAATTATGAGAGTATTGATATTGAAAACAGAAAGAGGTTTGCTGCTCAGTTATTGCGAAATTTTGTGACCTAG 2136 0.411 MATYFHGNSNSNSSEIQPSVEGLQTLYLMNPNYVPYSEEEPQNPTQNMLFANPNATTNNNTSPHALHGFKFPHAPSSLNQHHLLGVTIPPSNFHGSNTTDTPTQPYEVSTFHPFASSATVTPRPHYNMWGSGSFIPDHTVTATTTDRSECSDVVAVTSSTEFRSQQIGFHRPIYQRGLSLSLSSQQTPYRSASGEIEVSPGSRGGEEGGGVSTMNGVVFGSKYLKVAQELLDEVVNVDKGIIKGESVEGGNSNNNKEKRKVNIESSSSGGRENDGGKQVAELSTAQRQELQMKKSKLVSMLDEVELRYRQYHHQMQSVISSFEQATGYGASKSYTSLALKTISKQFRSLKDSISSQIKTASKTLGEDDCLGVKLEGSRLRYVDHQLRQQRALQQLGMIHSNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQEENNDSKDNTNKSKELGVTKLDQINNLHSKAENFNNQNPSPTVISSSNNSMSTSTMGGEGGSFQSNSGFHLAGSSDVQRSPKNSHQGSFLSMDMEMKSNRESNIEVEVERHNQDKNGYPLMSGNENHHDGGYGSFSMEDIRRFNVSEQLAPRFHGNGVSLTLGLPHNENIPLSSTQHGFLSQNLHLGGTIDEMGSNENEFCTINTTPSHSETNYESIDIENRKRFAAQLLRNFVT* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1492 711 MobiDBLite consensus disorder prediction 507 563 - -
Mtr4g1492 711 Coils Coil 287 307 - -
Mtr4g1492 711 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 11 660 - -
Mtr4g1492 711 SUPERFAMILY Homeodomain-like 404 469 IPR009057 -
Mtr4g1492 711 Pfam Homeobox KN domain 420 459 IPR008422 GO:0003677|GO:0006355
Mtr4g1492 711 MobiDBLite consensus disorder prediction 244 278 - -
Mtr4g1492 711 SMART HOX_1 403 467 IPR001356 GO:0003677
Mtr4g1492 711 MobiDBLite consensus disorder prediction 189 211 - -
Mtr4g1492 711 Gene3D - 406 486 - -
Mtr4g1492 711 SMART prehox3 215 355 IPR006563 -
Mtr4g1492 711 MobiDBLite consensus disorder prediction 472 493 - -
Mtr4g1492 711 CDD homeodomain 403 464 IPR001356 GO:0003677
Mtr4g1492 711 MobiDBLite consensus disorder prediction 472 491 - -
Mtr4g1492 711 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 11 660 - -
Mtr4g1492 711 ProSiteProfiles 'Homeobox' domain profile. 400 463 IPR001356 GO:0003677
Mtr4g1492 711 Pfam Associated with HOX 217 354 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1492 Mtr-Chr4 26417033 26422994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1492 1 711 Homeobox Transcription Factor Family AT2G35940 42.819 4.64e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mtr4g1492 POX 2.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1492 - - mtr:MTR_4g051532 1352.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1492 4 26417033 26422994 Mtr4g1492 4 26417033 26422994 ECH