Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1484 ATGGGTGTCCCAGGCAAGTGGATTAGAGCATTGGTTGGCCTAAAGAAATCAGAAAAGCGTGAATCCTTAGAGAAGGATGGAAATCAGGCTAGCAAGTTTCGCCATCGGAGAAAAAATTCCGTTGAAATTGACAACGGAAAACTTCAAAATGAGTTTGACAATGATGGTGCTGCACCTATTGGAGATGCAGATCATGCGAATCCCCAATCTAACCTTGAAGCCCATTATTCTCCTTCTACTTCACAACAAGTACAGGATCCTGCACATAATCATCAAATCACAAGCGAAGAATGGGCAGCAATATGCATTCAAACAGCGTTTCGTGGATTTCTGGCCAGGAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAAGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGCTTGTCATTGGAAAGTCAAACAGAACAACAGAAACTTCAGCAACAGCTTGTAAACGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCAGGCCATTTCTTCAGGATTTGAACCTGATAAAAGCAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGTTTTCTTGACATTAATACGAAGGATGGAGTGAAGGCAGACGAAAATGATGTTATGGATGGTAGAAATGGAATCAGACCTCAGTTCAAGTCTACTAACACAAAATCTAATCTGGCAAATATTCATCCAAGCGTTGTCAGTCACAAAACCGGCCCTTCTCTTTCTGATGGCTGTGATTCTTCTTCCACTAGCAAGTCAGCAGGTTTGCTAGAGACATCGAATACACAATCTGTTAAACCAAAATCTAATGCAAATGTTCAAAATCCCGTTGAAGAAACCAACTCAAAATCTGGAGTTCAAAGATCTCAAAGTAATCCAAAGGAGAGAAACTCACAAGTAGATAAACCGGCGAAAAAGCGATTATCTCTTCCCAACCATGCAGGGGTTGGTTCCGGGGCTCAAACAGCCAAATATCCTACCAGATCTAACATGAAAGGGACACGTAGCACGCAAAAGCCTACAAGGGATAAACCTAAGCTCAATGGAGGAGGGGATGTGAATCTTACAAAATCAGTTCCACCGCCTGCAGTTGTGTAA 1323 0.4384 MGVPGKWIRALVGLKKSEKRESLEKDGNQASKFRHRRKNSVEIDNGKLQNEFDNDGAAPIGDADHANPQSNLEAHYSPSTSQQVQDPAHNHQITSEEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLESQTEQQKLQQQLVNEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAISSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGVKADENDVMDGRNGIRPQFKSTNTKSNLANIHPSVVSHKTGPSLSDGCDSSSTSKSAGLLETSNTQSVKPKSNANVQNPVEETNSKSGVQRSQSNPKERNSQVDKPAKKRLSLPNHAGVGSGAQTAKYPTRSNMKGTRSTQKPTRDKPKLNGGGDVNLTKSVPPPAVV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1484 440 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Mtr4g1484 440 PANTHER IQ-DOMAIN 5-RELATED 2 403 - -
Mtr4g1484 440 PANTHER IQ-DOMAIN 5-RELATED 2 403 - -
Mtr4g1484 440 MobiDBLite consensus disorder prediction 288 372 - -
Mtr4g1484 440 MobiDBLite consensus disorder prediction 275 440 - -
Mtr4g1484 440 Gene3D - 96 138 - -
Mtr4g1484 440 MobiDBLite consensus disorder prediction 18 90 - -
Mtr4g1484 440 MobiDBLite consensus disorder prediction 70 90 - -
Mtr4g1484 440 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Mtr4g1484 440 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Mtr4g1484 440 MobiDBLite consensus disorder prediction 18 44 - -
Mtr4g1484 440 MobiDBLite consensus disorder prediction 397 411 - -
Mtr4g1484 440 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1484 Mtr-Chr4 26243771 26249582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1484 1 423 IQD Protein Family AT3G22190 53.721 5.17e-116 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1484 - - gmx:100787148 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1484 4 26243771 26249582 Mtr4g1484 4 26243771 26249582 ECH