Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1482 ATGTTTGGAAGAGCACCGAAGAAAAGTGATAGTACGAGGTACTATGAAATCTTAGGTGTATCTAAGACAGCTTCTCAGGATGATTTGAAGAAAGCTTATAAAAAAGCTGCTATTAAGAATCATCCTGATAAGGGTGGTGATCCCGAGAAGTTCAAAGAGCTAGCGCAAGCTTATGAGGTTCTGAGCGATCCTGAGAAGCGTGAGATATATGACACGTATGGTGAGGATGCTCTTAAGGAAGGAATGGGTGGTGGAGGTGGTGGTGGCCATGACCCATTTGACATCTTCTCGTCTTTCTTTGGTGGTGGAGGTGGTGGTAGTAGCCGAGGACGGAGGCAGAGACGTGGAGAAGATGTGGTTCATCCTCTCAAGGTCTCTTTGGAGGACCTTTACCTTGGGACATCTAAGAAGCTTTCTCTCTCGAGAAATGTCTTGTGCTCAAAATGCAGTGGCAAAGGTTCTAAATCTGGGGCTTCCATGAAATGTGCTGGTTGTCAAGGAACTGGTATGAAGGTTTCTATTAGACACCTTGGTCCATCAATGATTCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACCGGTGAAACTATCAATGATAAAGACCGCTGTCCGCAGTGCAAGGGAGAAAAGGTTGTGCAAGAGAAGAAAGTACTTGAAGTTCATGTCGAGAAAGGAATGCAGAACAGTCAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCACCAGACACAGTTACTGGGGATATCGTATTTGTGCTTCAGCAGAAAGAACATCCCAAGTTCAAAAGAAAGAGTGAAGACCTTTTTGTAGAGCACACACTGTCTCTTACCGAGGCTTTGTGTGGTTTCCAATTTGTGCTTACTCACTTGGATGGTCGCCAACTTCTTATCAAATCAAACCCCGGAGAAGTTGTCAAGCCTGATTCATACAAGGCTATTAACGACGAGGGAATGCCGATGTACCAGAGGCCATTTATGAAGGGCAAGCTTTACATTCACTTCACCGTGGAATTCCCCGACACCCTAAGTCTTGATCAGGTGAAAGGTTTGGAGGCTGTTCTTCCAGCTAAACCTTCATCACAGTTGACAGACATGGAGATCGACGAGTGTGAGGAAACTACACTTCATGATGTCAATATGGAAGAGGAGAATAGGAGGAAACAACAGCAACAACAACAGGAAGCATATGATGAGGATGATGATATGCCTGGTGGGGCACAGAGAGTACAATGCGCCCAGCAGTAG 1251 0.4524 MFGRAPKKSDSTRYYEILGVSKTASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDTYGEDALKEGMGGGGGGGHDPFDIFSSFFGGGGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCSGKGSKSGASMKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNSQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVEFPDTLSLDQVKGLEAVLPAKPSSQLTDMEIDECEETTLHDVNMEEENRRKQQQQQQEAYDEDDDMPGGAQRVQCAQQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1482 416 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 416 IPR044713 GO:0006457|GO:0030544
Mtr4g1482 416 SMART dnaj_3 12 66 IPR001623 -
Mtr4g1482 416 CDD DnaJ 14 63 IPR001623 -
Mtr4g1482 416 PRINTS DnaJ domain signature 15 33 IPR001623 -
Mtr4g1482 416 PRINTS DnaJ domain signature 46 66 IPR001623 -
Mtr4g1482 416 PRINTS DnaJ domain signature 66 85 IPR001623 -
Mtr4g1482 416 Coils Coil 380 401 - -
Mtr4g1482 416 Hamap Chaperone protein DnaJ [dnaJ]. 10 367 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mtr4g1482 416 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Mtr4g1482 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 263 350 IPR008971 GO:0006457|GO:0051082
Mtr4g1482 416 Gene3D - 146 212 - -
Mtr4g1482 416 Gene3D - 110 258 - -
Mtr4g1482 416 CDD DnaJ_zf 146 212 IPR001305 GO:0031072|GO:0051082
Mtr4g1482 416 ProSiteProfiles Zinc finger CR-type profile. 133 217 IPR001305 GO:0031072|GO:0051082
Mtr4g1482 416 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 7 416 - -
Mtr4g1482 416 Pfam DnaJ domain 14 71 IPR001623 -
Mtr4g1482 416 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Mtr4g1482 416 Pfam DnaJ C terminal domain 120 341 IPR002939 -
Mtr4g1482 416 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 143 215 IPR036410 -
Mtr4g1482 416 CDD DnaJ_C 117 344 - -
Mtr4g1482 416 Gene3D DnaJ domain 10 109 IPR036869 -
Mtr4g1482 416 MobiDBLite consensus disorder prediction 377 416 - -
Mtr4g1482 416 Pfam DnaJ central domain 146 212 IPR001305 GO:0031072|GO:0051082
Mtr4g1482 416 MobiDBLite consensus disorder prediction 377 396 - -
Mtr4g1482 416 Gene3D - 260 342 - -
Mtr4g1482 416 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Mtr4g1482 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 112 270 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1482 Mtr-Chr4 26222912 26226682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1482 14 73 C2H2 Transcription Factor Family AT1G74250 43.478 5.61e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1482 K09503 - gmx:547558 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1482 4 26222912 26226682 Mtr4g1482 4 26222912 26226682 ECH
Mtr2g2936 2 42975539 42978169 Mtr4g1482 4 26222912 26226682 ECH
Mtr2g2936 2 42975539 42978169 Mtr4g1482 4 26222912 26226682 PCT