Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1471 ATGGACAAAGATACATCAACTTCTTTTCAAATTCCTCAGGAATATGAATGTGTGCCAAATTGTGATGATGAATTAAAGCCTAAGATTGGACAAGTATTTGATACGTTACAAGAAGGTAAATTTTTTTACGAAAAATACGCACTCTCTATCGGATTTAGTGTGCGTTCATCATCATCGACTATAGATAAAAACGACTTGAAGCGTTGGAAGTATTTTGTTTGCTTGAAAGAGGGATATTTGCCAAATAAGACGGATGATAAGGAGCAAAGTGAATCTATTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTTAAATGGGTGGGGGAAGGTAAGTATGAGATAGCTCGATTTCATGAAAGCCATACACATCCACTTGCTTCACCTATGAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCAAGTCACAAAAGCTTATTACTTGCATGTAGTAGAGCAAATATTGGACCTTCAAAAGCTTTCCACTTGTTAAAAGAACAACGTGGGGGTTATGAAAATGTTGGATGCACGCAGAGAGATCTTCAAAACTATTCCAGAGATTTAAAGACTTTGAATAAAGATTCTGATGCACATGTTTTGATAGACTACTTTAGAAGGAAGCAAGAAGTTAATTCATCTTTTTATTATGCGTATGAGGTAGGTGAAGAAGGCCGACTGAAGCATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCCTTATTTGGAGATGTGGTTTCATTTGATACTACATATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCACTGGGATAAACCATCATCGACAATCTATTACCTTCGGAGTAGGACTTATAACAAATGAGAAAAGTGATTCATTTGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGTGGACATAAGCCAACACTTATAATAACCGATCAAGATCCTTCCATGAAAGTGGCTATAGAAAATATTTTTGATACTTCTACTCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTTTCCACGAACGACGATGATGAATTTAACAGAAGCTTCAAGTCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGACTTGGGCGTTTTTGATGACAAGGTTTGAGTTAGAAAAGAATAAATGGTTGTTACATATGTTTGATATTCGAAGCATGTGGATCCCAGCATACTTCAAAGACACTTTTATGGCTGGGATATTGAGAACAACATCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAATTTCCTGAATCCTAATGTTAACTTGGTTGAATTTTGGATGAGGTTTGATTCAGCAATAGAAGCGCAACGGCATAAGGAGTTACTGGCTGATAATAACTCAATTCATTCTAAACCAAAACTAAAGTTGGAACGTGGAAGATAA 1461 0.3552 MDKDTSTSFQIPQEYECVPNCDDELKPKIGQVFDTLQEGKFFYEKYALSIGFSVRSSSSTIDKNDLKRWKYFVCLKEGYLPNKTDDKEQSESIVKAKRRRALTREGCNANVVFKWVGEGKYEIARFHESHTHPLASPMKRPFLRSARKVNSSHKSLLLACSRANIGPSKAFHLLKEQRGGYENVGCTQRDLQNYSRDLKTLNKDSDAHVLIDYFRRKQEVNSSFYYAYEVGEEGRLKHVFWADGICRKNYSLFGDVVSFDTTYQTNKYHLIFAPFTGINHHRQSITFGVGLITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKVAIENIFDTSTHRLCMWHIMKKVSEKVGVSTNDDDEFNRSFKSCVWGSETPNEFEETWAFLMTRFELEKNKWLLHMFDIRSMWIPAYFKDTFMAGILRTTSRSESENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNNSIHSKPKLKLERGR* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1471 486 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 481 IPR031052 GO:0006355
Mtr4g1471 486 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 15 481 - -
Mtr4g1471 486 Pfam MULE transposase domain 256 350 IPR018289 -
Mtr4g1471 486 Pfam FAR1 DNA-binding domain 42 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1471 Mtr-Chr4 26104784 26107847 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g1471 MULE 3.5e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1471 - - cqi:110709295 543.117