Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1468 ATGTTTAACGGTATGATGGATCCTGATTTGATCCGAATCGCTCAAGAACAGATGAGTCGTATGACACCTGCTGATATGGCCAGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCTTCAGAAAGCATGAAGAATATGAATCCTCAAGATTTTAAAATGGCGGCTGAACAGTTAAAGCATACACGGCCTGAAGAGATGGCTGAGATTGGTCAGAAGATGGCTAATGCATCTCCCGAAGAAGTAGCAGCTATGCGTGCTCATGCTGATGCTCAGGTCAAATATCAATTGAGTGGGGCTGAGATGTTGAAGAACCAGGGAAATGCACTTCACAGTCAAGGAAAGTTCGATGAAGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAACATTAAAGAGATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCGCTTTCACTAAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATGAAGAATGCATAAATGAAGGTTCTGAGGTTTTAGTATATGATGCAAAGAACCTCAAGGCTCTTTATCGAAGAGGTCAAGCGTATAAGGAACTAGGCCAGCTACATGAAGCCGTTTCTGATTTGAGCAATGCAGTTGAAGTGTCTTCTGGCGATGATACAATTGCAGATCTTTTACGGGATACCAAGGAACAGTTGATAAAGGAAGGTGGTGATCGTGCACCCAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGACGAGAATGTGCCTTCTGGAAACAACAGAAGCTCTTCTTCTGAACAAAAAGTTGATCAACCAAAAAAGTTTGGTGACTCTTCTAAGAGTAAAAGTATAGCTAACAATGGGAATCCAAAATCAACTTCAGAGAGTTTAGATGCACTGAAAAAAGATCCAGAAGCCATCAGATCATTCCAAAACTTCATTTCAAATGTCGATCCTGCCACTCTGGCTTCTTTAAATAATGGACAATCCAAAGATGTGTCTCCAGATATGATTAAAGCATCCTCGGAAATGATTGGCAAGATGTCACCTGAGGAACTTCAGAAAATGCTTGACATGGCATCTTCATTTCAAGGGGACAATCCATTTTTTGGAGGAGGTTCCTCTAATTCTCCTTTCAACCCAGGATCTATTCCTCCCAACGTGACACCCGATATGTTTAAAACTGCAAGTGATATGATGAGTAAAATGCCACCAGATGAGCTTAAGAAGATGTTTGAAATGGCATCCTTACTGAAAGGGAAAGAATCTATTCCATCATCAGCAGCTGTGGACAAGAATGAAAGAAATGTTTCACAGTCAAACTTCCCATCCTCAAGCACCACTCGTGCTTTTGGAGAACCAAGTTCTTCTAACAATGCGTTTTCAAATATTAGAAATGCTTCAGAGCCAAACTTCCCATCCTCAAGTATTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGGTTAAAAATATGAGCCCAGAAGTGATGGCAAACATGGGAGAGCAATTTGGTTTCAAGCTTTCACCAGAAGAAGCAGCAAAAGCTCAGCAGGCGATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGCTTCAAAGAGGAGCTGAATGTGCTAAAAGAACAAAGAATTGGTTGCTAGGAAGATCAGGCCTTGTCTTCGCAATATGCATGCTCATTTTGGCTTTCATTCTTAACCGGTCAGGTTTCATTGGTAGCTAG 1761 0.41 MFNGMMDPDLIRIAQEQMSRMTPADMARIQQQMMSNPELMRMASESMKNMNPQDFKMAAEQLKHTRPEEMAEIGQKMANASPEEVAAMRAHADAQVKYQLSGAEMLKNQGNALHSQGKFDEALQKYKLAKENIKEIPSFQSRKLLLALSLNLMSCYLKTRQYEECINEGSEVLVYDAKNLKALYRRGQAYKELGQLHEAVSDLSNAVEVSSGDDTIADLLRDTKEQLIKEGGDRAPRKLVIEEITEEDENVPSGNNRSSSSEQKVDQPKKFGDSSKSKSIANNGNPKSTSESLDALKKDPEAIRSFQNFISNVDPATLASLNNGQSKDVSPDMIKASSEMIGKMSPEELQKMLDMASSFQGDNPFFGGGSSNSPFNPGSIPPNVTPDMFKTASDMMSKMPPDELKKMFEMASLLKGKESIPSSAAVDKNERNVSQSNFPSSSTTRAFGEPSSSNNAFSNIRNASEPNFPSSSIDLQEQMRNQMKDPAMRQMFTSMVKNMSPEVMANMGEQFGFKLSPEEAAKAQQAMSSLSPENLDKMMLWADRLQRGAECAKRTKNWLLGRSGLVFAICMLILAFILNRSGFIGS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1468 586 SMART tpr_5 103 136 IPR019734 GO:0005515
Mtr4g1468 586 SMART tpr_5 146 179 IPR019734 GO:0005515
Mtr4g1468 586 SMART tpr_5 180 213 IPR019734 GO:0005515
Mtr4g1468 586 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Mtr4g1468 586 MobiDBLite consensus disorder prediction 422 471 - -
Mtr4g1468 586 PANTHER OUTER ENVELOPE PROTEIN 61 59 586 - -
Mtr4g1468 586 MobiDBLite consensus disorder prediction 425 471 - -
Mtr4g1468 586 Gene3D Tetratricopeptide repeat domain 89 234 IPR011990 GO:0005515
Mtr4g1468 586 SUPERFAMILY TPR-like 97 220 IPR011990 GO:0005515
Mtr4g1468 586 MobiDBLite consensus disorder prediction 274 291 - -
Mtr4g1468 586 MobiDBLite consensus disorder prediction 243 294 - -
Mtr4g1468 586 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1468 Mtr-Chr4 26082173 26089187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1468 93 227 Calmodulin-binding Proteins AT5G48570 29.078 1.89e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1468 - - cam:101514495 936.791