Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1467 ATGACGAATGTTAGTGATGCTGAACAATTCGTGATAAAGTATAAAGTACGTACAGGGCACAAGAGAGAGTTTGCCTTTGCACTTAACTCTCACTCTGAGATCGGGATCTCATTGAGTAAAACCCGACCTCGTAAGAACCAAAATATGGTTCCTACTCCTAAACCTAAGAAGACACGAATGTCCAGTTCACAGGAAGAACTAAACGACAATGTTGTTGAAGAAATCTTCACAAAAAATGGTGATGATGATAAGAAGAAATTAAAGAATAAGAAGGTGAACAAAAAGAATAAGAAGGCACCAACTCGAGGGAAAAAGCCAGAGTTTTGTGTGAATTGCAGAGATGTCAATGTTGTGTCAGGACTAGTCTATAGTTCATGTGAGGAATCAAAGAATAGTCAACCAGGTCCAAGACATACAACTCAGACCAGTAATAGTCATGTCTCACCAACAACCGCTAATTACAGATCTCGCAAACCGATTGTGCCTCAAAGTTCATCATACAAAGGAATGAAGTGCATCACATATTGTGATAAGAGTCCCCAGAGACTAACTAGGAAGGATCAATGCTTGCATAAGTTGGTGTTTCATGAAAGTGTGTTGAAAGATGGAGCTGCAGTAGGATATTTTGTTGATGGAGAGAAACAATTACATGGAGAAATAAACATAAACAAATTTGGTATTTTGTGTGATTGTTGCAACAAAGTGGTGAGCCCTTCTAAGTTTGAAGCACATGCAGGTTGGGCATCACGAAGGAAACCTTACTCGCACATACGCACCTCTAATGGAGTCTCACTACATGAGTTGGCCATTAACCGGAGAAATTCTATGTCTGATAGTGATGAACATTGCAGTAGTTGTCAACAAAGAGGGGATCTTTTATGTTGTGATGGATGTCAAAGATCTTTTTACTTAGATTGTATTGATCTTAAATCCCAATCAAATAGCAAGTGGTACTGTAAATATTGGCGTAATAAATTCCAAAAGGACAAAAATGTAGAGCATAAAGCAAATGATGTGCCAACTGGAAGGATTGCAGAGGGTGGTCCTTCAAAACAAATAGTCGAGATAAGCACCCTTTCAGTAAAACAGAAAGTGGTTGAGGATAGTTCATGTGCATTGTGCAGCAAACAAGATTTCAACAATAATGAGTTTGGTCCATGGACAGTAATGATTTGTGACCAGTGTGAGAAGGGATATCATGTTGAGTGTTTGAAGGATCATAACATGGCTAACCTAGAGAAAGTACCTGAAGGTAATTGGTTCTGCAACGTAGATTGTGATGATATTCACATGAAACTAAAGAGTTTTATGGCTCGTGGGGATTCACTTCTTTCAGATTACCTCTTAAATTTGATTAAAAAGAAGCAAGAAAAAAAAGGGTTTGAAACTGAATTAGGTCTTGATATAAAATGGAAGATTTTCAACACGAAGTTGATTGATTCTGGAATTATTACTAGTTCGTTCCTTTTCAATGTTGCTGCTATTTTTCATGAACAATTTGATTCCATAGTTGATACTGGAACAGACATTGATTTAATTCAAGCAATGCTTCGTGGGACGGAGATCGATGATAAATATTATTTTGGTGGAATGTATTGTGCAGTGCTCATTGTCAACCAAGTGGTTGTATCAGCTGGGATTTTTCGCGTGTTTGGAAAAGATGTGGCAGAGCTTCCCTTAGTTGCAACTAAGGCTGAATACAAAGAACAGGGTTTCTTTCGTTCCCTATTTTCCTGCATAGAGGATGTACTTATACAATTAAAGGTAAAATGGTTAATTTTACCGGCAGCTCATGAAGCTAAGTCAATGTGGAAAAAAAAATTCGGGTTCACAACGCCCAAACAAGAGTTGATGAACGATTTTAGGAAATTCTACCATAATTTGATGATATTTGAAGGGACGTCGTTACTACAGAAGAAGTTAGTTCCTCCATCTCAATAA 1941 0.3771 MTNVSDAEQFVIKYKVRTGHKREFAFALNSHSEIGISLSKTRPRKNQNMVPTPKPKKTRMSSSQEELNDNVVEEIFTKNGDDDKKKLKNKKVNKKNKKAPTRGKKPEFCVNCRDVNVVSGLVYSSCEESKNSQPGPRHTTQTSNSHVSPTTANYRSRKPIVPQSSSYKGMKCITYCDKSPQRLTRKDQCLHKLVFHESVLKDGAAVGYFVDGEKQLHGEININKFGILCDCCNKVVSPSKFEAHAGWASRRKPYSHIRTSNGVSLHELAINRRNSMSDSDEHCSSCQQRGDLLCCDGCQRSFYLDCIDLKSQSNSKWYCKYWRNKFQKDKNVEHKANDVPTGRIAEGGPSKQIVEISTLSVKQKVVEDSSCALCSKQDFNNNEFGPWTVMICDQCEKGYHVECLKDHNMANLEKVPEGNWFCNVDCDDIHMKLKSFMARGDSLLSDYLLNLIKKKQEKKGFETELGLDIKWKIFNTKLIDSGIITSSFLFNVAAIFHEQFDSIVDTGTDIDLIQAMLRGTEIDDKYYFGGMYCAVLIVNQVVVSAGIFRVFGKDVAELPLVATKAEYKEQGFFRSLFSCIEDVLIQLKVKWLILPAAHEAKSMWKKKFGFTTPKQELMNDFRKFYHNLMIFEGTSLLQKKLVPPSQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1467 646 MobiDBLite consensus disorder prediction 127 157 - -
Mtr4g1467 646 MobiDBLite consensus disorder prediction 81 105 - -
Mtr4g1467 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 346 IPR013083 -
Mtr4g1467 646 Pfam Tify domain binding domain 222 269 IPR032308 -
Mtr4g1467 646 MobiDBLite consensus disorder prediction 37 69 - -
Mtr4g1467 646 SUPERFAMILY FYVE/PHD zinc finger 275 325 IPR011011 -
Mtr4g1467 646 Gene3D - 468 644 - -
Mtr4g1467 646 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 502 612 IPR016181 -
Mtr4g1467 646 PANTHER AUTOIMMUNE REGULATOR 1 101 - -
Mtr4g1467 646 PANTHER AUTOIMMUNE REGULATOR 125 639 - -
Mtr4g1467 646 SMART PHD_3 282 323 IPR001965 -
Mtr4g1467 646 SMART PHD_3 370 426 IPR001965 -
Mtr4g1467 646 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 490 634 IPR000182 GO:0016407
Mtr4g1467 646 PANTHER AUTOIMMUNE REGULATOR 1 101 - -
Mtr4g1467 646 PANTHER AUTOIMMUNE REGULATOR 125 639 - -
Mtr4g1467 646 SUPERFAMILY FYVE/PHD zinc finger 363 424 IPR011011 -
Mtr4g1467 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 429 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1467 Mtr-Chr4 26071681 26076148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1467 182 641 PHD Transcription Factor Family AT2G36720 43.750 2.11e-126 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1467 - - mtr:MTR_4g050090 1286.17