Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1457 ATGGATTCAAATCCACTTAATAGTACTATCCCTTTCCTAGTCAATGTAAGGTCCTCCAATGAAAATCAAAACTCTCCAATCTCATCTCATGAAACAAAAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCATCAAGTTGTCTCTGCCTCTGTCCCTGACAATGATCATATTCATACTGATACATCATCTTTGTTGGAACTCAAGCTGAGTCTTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTATGATGGATGATGGCATGTCACCTAATTCAGAAGACAAGAGAACTAAGAGGGAGTTGGCTATTCTTCAAGGCGAGCTTAAACAAACAAAAATGGAGAACTGTAGATTAAAATTGATGTATGATCAGCTTAAAACAGATTACAATAACATGCGGATGCATAACAAGAAAGTGATGCAAGACCGTAAGGTAAAGGAAGTTAAAGGAAAAGAAGCCATTGATGGAAAATTTAAAGAGAAAAAAAGAATTGAGAATGGTGGACTATTGGAGCCAAGGAAATTTATGGATCTTGGATCGACTACTAATAAGGTTAAGGAAGTTAAAGGACAAGATGTTTCTGATGGAAAATTTGGTGAGAAAAAGAGAATGAAGAATGGTGGAGAATTAGTGAAAAGGAAATTTGTTGATGCTGGGTTGGCTACTAATAAGGTTAAAGAAGTGTTTAATGGTAAATTTGAAAAGAAAACGAGAATTGAAAATGGTGGAGAGTTGGTGCAAAGGCAATGTAGGGATCTTGTGTTGATTAATAATGTTGAGACTGCGATGGATCATGAAGCTTCTTCCTCATCAATGAGAAAACCTAGAAGTAAGGATCAGTTAGGATCGACGTTAAAAAGCATCGAGGAGGCTTCGAAGGAGTTAGTCCTAAGTAAGAATGAGGATGTTAATGTTGATAATGCCGAGGCTACATCGACAAAAGCAAGAGTTACTATTAGAGCTAGATCACAAGAAACCATGATCACTGATGGATGTCACTGGAGAAAGTATGGACAGAAACTGACGAAAAGAAACCCATGTCCTAAAGCGTATTATCGTTGCAGCATGGCTTGTGGTTGCCCAGTTCGAAAACAGGTACAAAGGTGTGATCTTGATAGAACAGTTGTCATCACAACATATGAAGGAAATCACAACCACCCTTTACCTGCAACAGCCAAAGAAATGGCAAAAACAACTTCAGCAGCTGCAAAGATGCTTCTTTCAACATCAACATCAAGCAATGATGGACAACTGAATGCCAATTTACTCAAAAGAACGCCCCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAGCTTCTGCACCATTTCCAACCATTACACTTGATTATACTCAATCTTCGAATACTCCACAAAGGAACCCAAATCAATTTCAAACTCCTTTAACTTGTCAAAATTTTTCAAATTCCTCATCTTCTCTGGTCTCTCAAACACCTAATCAGAACCAATCAAAATTTTCTGGACTACCAATGTCAAAAGTTGCAGCTGTCCCTTCAAAACTATTGGCAGTACCACATATTGCTCAGGCAGTTAATGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAACTTTGTCAGCTACTCTTACTTCCAAGATTGGTGATACTCAGCCAAACAACACCGTTGTTGCAGCTGATAATAATAATGGGAACAATGTCACAAAGGTAATAACAATGGAAATACCACAGGTAGCACCAACAATGATGGGAAGGAATAAAATCAGGAATATCAATTACAAGACCTAA 1782 0.3782 MDSNPLNSTIPFLVNVRSSNENQNSPISSHETKIEFDFFKDNNNDHHQVVSASVPDNDHIHTDTSSLLELKLSLGPNPVTTNTSSDQSMMDDGMSPNSEDKRTKRELAILQGELKQTKMENCRLKLMYDQLKTDYNNMRMHNKKVMQDRKVKEVKGKEAIDGKFKEKKRIENGGLLEPRKFMDLGSTTNKVKEVKGQDVSDGKFGEKKRMKNGGELVKRKFVDAGLATNKVKEVFNGKFEKKTRIENGGELVQRQCRDLVLINNVETAMDHEASSSSMRKPRSKDQLGSTLKSIEEASKELVLSKNEDVNVDNAEATSTKARVTIRARSQETMITDGCHWRKYGQKLTKRNPCPKAYYRCSMACGCPVRKQVQRCDLDRTVVITTYEGNHNHPLPATAKEMAKTTSAAAKMLLSTSTSSNDGQLNANLLKRTPLPCSSSIATISASAPFPTITLDYTQSSNTPQRNPNQFQTPLTCQNFSNSSSSLVSQTPNQNQSKFSGLPMSKVAAVPSKLLAVPHIAQAVNAAIAANPNFPATLSATLTSKIGDTQPNNTVVAADNNNGNNVTKVITMEIPQVAPTMMGRNKIRNINYKT* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1457 593 ProSiteProfiles WRKY domain profile. 329 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1457 593 SUPERFAMILY WRKY DNA-binding domain 328 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g1457 593 Gene3D WRKY domain 318 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g1457 593 SMART WRKY_cls 334 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1457 593 PANTHER OS05G0567200 PROTEIN 8 564 - -
Mtr4g1457 593 Pfam WRKY DNA -binding domain 336 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1457 593 MobiDBLite consensus disorder prediction 270 289 - -
Mtr4g1457 593 MobiDBLite consensus disorder prediction 74 101 - -
Mtr4g1457 593 MobiDBLite consensus disorder prediction 74 94 - -
Mtr4g1457 593 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 564 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1457 Mtr-Chr4 25884352 25887901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1457 89 545 WRKY Transcription Factor Family AT4G04450 41.756 2.35e-88 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g1457 WRKY 5.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1457 - - mtr:MTR_4g049790 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2955 2 43155615 43159333 Mtr4g1457 4 25884352 25887901 PCT