Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1455 ATGAAGTGGAACAGAGGCCACGCTATAGGCCATGGCTCAACATCAACCGTCAGCCTAGCCACCGTTAGCGGCGAAATCTTTGCCGTCAAGTCATCCGAGCTATCGAGATCAGAGCCTCTACAAAGAGAGGAGAAAATTCTATCTTCTCTATGTTATCCGAATCCTCATGTGGTTTCATATAAAGGGTGTGACATTACCAAGGATAATGAGAAGTTCATGTACAATCTCTTCATGGAGTACATGCCGTTTGGCACGCTTAGCCAACACGGTGGCATGCTCGACGAGCAAGCCATCATGTGCTATACAAGGCAAGTTGTAAAGGGGTTAGAGCATTTGCATTCAAAAGGGTTGGTGCATTGTGACATCAAGGGTGCCAATATCATGATTGGTGAAGATGGGGCTAAAATTGGAGACTTTGGATGTGCTAAAAGTGTAAATGAAGCCGCGGCGCCAATCCGCGGAACACCGGTGTTCATGGCACCAGAAGTGGCACGTGGAGAAGAACAAGAGTTTTCTAGTGATATTTGGTCACTTGGTTGCACTATAATTGAAATGGCAACTGGTTCTTCACCATGGCCTAATGTAGATGACCCTATTTCAACACTTTATCATATAGCATATTCCAATGATGTTCCTCAAATTCCATGTTTTCTATCAAATCAAGCAAAAGACTTTTTAGGGAAATGTTTAAGGAGGAATCCAAAAGAGAGATTTTCAGCTAGTCAACTTTTGAAGCATCCATTTCTTGGGGAATTATTATGTTCTAATGATAAGCAAGTTTTGGAATCTAATTCAATTTCACCAACTAGTATTCTTGATCAATGCTTTTGGAGTTCTATGGAAGAATCACAAAGCCTTAGCTTTTGTAGTTTGATTCACACAACAAGTTTTGAGAATTCTTTGGTTGATGATAGGATCAAAAGGTTAGCAGGGGAACCATGTTTGGCATGGTGGCATGATGATCATGATGATGAAAATTGGATCACAATTAGAGGGAAGGAAGTTGATGGTTTTTGCAATTGTGGGTCAGAGATAGGTTCAACTAGTGATGAGTTGGTAAAAAGTAGTGTGAAAGATAGGATTAGTGGGCATTTTTGTAATGATCACACTCATATTTGTAGGGTTTCTAGTTTTGTAGGTAGTAATGTTAATTTTCAGCCAGACATTGTCAAGATGCTACTTCCATCAACATTAGATGTTTTATAA 1206 0.4013 MKWNRGHAIGHGSTSTVSLATVSGEIFAVKSSELSRSEPLQREEKILSSLCYPNPHVVSYKGCDITKDNEKFMYNLFMEYMPFGTLSQHGGMLDEQAIMCYTRQVVKGLEHLHSKGLVHCDIKGANIMIGEDGAKIGDFGCAKSVNEAAAPIRGTPVFMAPEVARGEEQEFSSDIWSLGCTIIEMATGSSPWPNVDDPISTLYHIAYSNDVPQIPCFLSNQAKDFLGKCLRRNPKERFSASQLLKHPFLGELLCSNDKQVLESNSISPTSILDQCFWSSMEESQSLSFCSLIHTTSFENSLVDDRIKRLAGEPCLAWWHDDHDDENWITIRGKEVDGFCNCGSEIGSTSDELVKSSVKDRISGHFCNDHTHICRVSSFVGSNVNFQPDIVKMLLPSTLDVL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1455 401 PANTHER MAP KINASE KINASE KINASE 1 347 - -
Mtr4g1455 401 SUPERFAMILY Protein kinase-like (PK-like) 3 284 IPR011009 -
Mtr4g1455 401 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 347 - -
Mtr4g1455 401 ProSiteProfiles Protein kinase domain profile. 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1455 401 Gene3D Transferase(Phosphotransferase) domain 1 2 308 - -
Mtr4g1455 401 Pfam Protein kinase domain 5 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1455 401 CDD STKc_MAPKKK 2 249 - -
Mtr4g1455 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Mtr4g1455 401 SMART serkin_6 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1455 401 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1455 Mtr-Chr4 25862760 25864228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1455 1 331 MAP Kinase Kinase Kinase AT1G05100 50.144 3.75e-108 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr4g1455 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1455 K20716 - gmx:100794648 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1455 4 25862760 25864228 Mtr4g1455 4 25862760 25864228 ECH
Mtr4g1455 4 25862760 25864228 Mtr4g4938 4 63518000 63519546 ECH
Mtr2g2956 2 43170170 43171511 Mtr4g1455 4 25862760 25864228 PCT