Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1443 ATGGGAGTGATTAAATCAGCCATAGGAGATGCAATTCTAACATCAATATTTGTTTTCTTCATCTCAACATTAAGAATTCTCTCTACAAAAACATCTCTTTTTCTCAACCTTCAACCACTTTCACTACCAGGCTTATTCATCACAACCATCCTAAACACAATAATCATCCTCACAATAAGCCTTATTGGAAGAATCTTAGGTGGTGCTAGTTTTAACCCTTCATCCACAATTTCCTTCTACACATTAGGACTAAGACCAGATTCATCTCTTCTATCTTTTGCCATAAGGTTTCCTGCTCAAGCAATAGGTGGAGCTATTGGCATCAAATCCATCCTTCAAGTTATACCAACAGAATACAAAGACATGGTGAAAGGTCCATCTTTGAAGGTTGATTTGCATACAGGTGCTATTGCTGAAGGGGTTTTGACTTTTACTCATAACTTTGTTATTCTTCTTGTTATGCTTAAGGGTCCTAAAAATCCTTGGTTGAAGGTTTATTTGCTTTCTGTGGCTACTTTGGTTTTGGTTATTATAGGTTCTGGCTACACTGGACCTTCTATGAACCCTGCTAATGCATTTGGTTGGGCTTATATGAACAATAAGCACAATACTTGGGAGCAATTTTATGTTTTTTGGATATGTCCTTTAATTGGTGCTAGTTCTGCTGCTATGGTTTATCGGTTTCTATTTATGTCACCAGTTAAGGAGAAGAAAGCTTGA 720 0.3694 MGVIKSAIGDAILTSIFVFFISTLRILSTKTSLFLNLQPLSLPGLFITTILNTIIILTISLIGRILGGASFNPSSTISFYTLGLRPDSSLLSFAIRFPAQAIGGAIGIKSILQVIPTEYKDMVKGPSLKVDLHTGAIAEGVLTFTHNFVILLVMLKGPKNPWLKVYLLSVATLVLVIIGSGYTGPSMNPANAFGWAYMNNKHNTWEQFYVFWICPLIGASSAAMVYRFLFMSPVKEKKA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1443 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1443 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1443 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1443 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1443 239 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 239 - -
Mtr4g1443 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Mtr4g1443 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
Mtr4g1443 239 PANTHER AQUAPORIN SIP1-1 1 239 IPR044222 GO:0015250
Mtr4g1443 239 Coils Coil 234 239 - -
Mtr4g1443 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1443 Mtr-Chr4 25689447 25690608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1443 1 230 Major Intrinsic Protein MIP AT3G04090 47.234 3.24e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1443 K09875 - gmx:100797126 348.591