Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1415 ATGGATGCTACACACAGTACTATCCCTTTCCAAGTCTCATCCAATGAAAATCAAACCTTTCAAATCTCATCTCATGAAACAAGAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCATCATGTTGAGACTCAAGTTGATGATCATATTCATACTGATACACCATCTTTGTTGGAACTCAAGATGAGTATTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTTTGATGGATGATGACATGCCACCTAATTTAGAAGACAAAAAATTCAAGAGGGAGATGGCTATTATTCAAGGCAAGATTGAACGAAAGAAAATGGAGAACTGCAGATTAAAAATGATGTATGATGAGCTTAGAACAGATTACAATTACATGCAGATGCGTTTTGAGAAAATGATGCAAGACCATAATGTTAAGGAAGTTACAGGAAAAGAAGTATTTGATGGAAACTTTAAAGAGAAAAAGAGAACTGAGAATGGTGGAGTAATGGGGCCCATGAAATTTATGGATTTAGGATTGGCTAGTAATAAGGTTAAGGAAGTTAAAGGAAAAGAAGTTTTTGATGGAAAATTTGGAGACAAAAAGAGAATGAAGAATGATGGAGAATTAGTGAAAAGGAAATATGTTGATGCTGGATTGGATACTAATAAGGTTAAAGAAGTGTTTAATGGAAAATGTGAAAAGAAAAAGAGAACTGAGAATGGTGGAGAGCTGGTGCAAAGGCAATGTAGGGATTTTGTGTTGAATACTAATGCTGAGACTACGATGGATCGCGAAGCTTCTTCCTCGTTAATGAGAAAACCTAGAAGAAAGGATCAATTAGGATCGACGATGAAAAGCATCGAGGTTGCTTCGAAGGAGTTAGTTTTAAGTAAGAATGAGATTGTTAATGTTGATAATGCTGAGGCTACATTGACAAAAACAAGAGTTACAATTAGAGCTAGATCAGAAGAAACCATGATAACTGATGGATGTGAATGGAGAAAGTTCGGACAGAAATTGTCGAAAGGAAACCCGTGTCCTAAAGCTTGTTATCGATGTAGCACATCCCGTGGTTGCTCAATCCAAAAACAGGTACAAAGGTGTGCTCTGGATAGAACAGTTGCCATCACAACATATGAAGAAAATCGTAACCTCCCGTTACCTGCAGCAGCCAAAGAAATGGTACAAACAACTTCAGCAGCTGCAAAGATGCTTCTTTCAGCATCAACATCAAGTAATGATGGACAATTGAATGCAAATTTACTCACAAGAACACCTCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAGCTTCTGCTCCATTTCCAACAATTACAATTGATTATACTCAATCTCCAAATACTCCACAAAGGAACCCATATCAGTTTCAAACTCCTTTAATCACTCATAGTTCTGCAAATTCCTCAACTTCTCTGATCCCTCAAATACCTAATCAGAACCAATCAAAATTTTCTGGACTACAAATGTCAAACGATGCAGCTGGCGCTTCACAACTATTGGCAATACCAAATATTGTTCAGATAGTTAATGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAGATTTGTTAGCTGCTCTTACTTCCATTATTGGTTATAATCGGCTAAATAACATTGCTGCTGATAATCATGACGACAACCATGTCACCGAAGGAAATAACAATGGTAGCAACAATAATGTCGCAGAAGACAATAGAAATGGAAACATCACAGGTAGCAGCAACAATGATGGGAAGAAATAA 1761 0.3697 MDATHSTIPFQVSSNENQTFQISSHETRIEFDFFKDNNNDHHHVETQVDDHIHTDTPSLLELKMSIGPNPVTTNTSSDQSLMDDDMPPNLEDKKFKREMAIIQGKIERKKMENCRLKMMYDELRTDYNYMQMRFEKMMQDHNVKEVTGKEVFDGNFKEKKRTENGGVMGPMKFMDLGLASNKVKEVKGKEVFDGKFGDKKRMKNDGELVKRKYVDAGLDTNKVKEVFNGKCEKKKRTENGGELVQRQCRDFVLNTNAETTMDREASSSLMRKPRRKDQLGSTMKSIEVASKELVLSKNEIVNVDNAEATLTKTRVTIRARSEETMITDGCEWRKFGQKLSKGNPCPKACYRCSTSRGCSIQKQVQRCALDRTVAITTYEENRNLPLPAAAKEMVQTTSAAAKMLLSASTSSNDGQLNANLLTRTPLPCSSSIATISASAPFPTITIDYTQSPNTPQRNPYQFQTPLITHSSANSSTSLIPQIPNQNQSKFSGLQMSNDAAGASQLLAIPNIVQIVNAAIAANPNFPADLLAALTSIIGYNRLNNIAADNHDDNHVTEGNNNGSNNNVAEDNRNGNITGSSNNDGKK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1415 586 SMART WRKY_cls 326 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1415 586 Pfam WRKY DNA -binding domain 328 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1415 586 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 564 IPR044810 GO:0003700
Mtr4g1415 586 MobiDBLite consensus disorder prediction 556 586 - -
Mtr4g1415 586 PANTHER OS05G0567200 PROTEIN 6 564 - -
Mtr4g1415 586 MobiDBLite consensus disorder prediction 550 586 - -
Mtr4g1415 586 Gene3D WRKY domain 313 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g1415 586 ProSiteProfiles WRKY domain profile. 321 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g1415 586 SUPERFAMILY WRKY DNA-binding domain 320 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g1415 586 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1415 Mtr-Chr4 25091269 25095163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1415 81 575 WRKY Transcription Factor Family AT4G04450 37.795 1.95e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g1415 WRKY 4.1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1415 - - mtr:MTR_4g049790 689.878