Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1396 ATGAAAATGGGAAACCAGAGTTACTTCAAGGTTTTAATTATTTGTCTTATAGCAATAATTGGATCAACTCATGCTCAATTGCAGCCAGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAACAAATTGTTTTGAAGTATGTTCATGACCACATTCCCAATGCACCATCACTAGCAGCTGCACTCATAAGGCTACATTTCCATGATTGTTTTGTCAAGGGATGTGATGCATCGGTACTTCTTAACTCAACACAAACCAATCAAGCTGAAAAGGATGCTATTCCAAATCTTACACTTCGAGGCTATGAATTCATTGACACAATAAAGAGCCTTGTTGAAAAAGAATGCCCTGGTGTTGTCTCTTGTGCTGATATACTCACTTTGACTGCTAGGGATTCTATCCATGCCATTGGTGGGCCTTATTGGAAGGTTCCAACAGGTAGAAGGGATGGTATCATATCTAAAGCAGCAGATACTTTTACTAGCCTTCCTGCTCCATTTCACAACCTCACTGTCCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACCTAGTCTTGCTTTCTGGTGCACACACAATTGGTGTTTCCCATTGCTCAACAATTTCAACAAGGCTATATAATTTTACTGGCAAGGGTGATCAAGACCCAGATCTAGACAATGAATATGCTAAAAATTTGAAAACATTTAAATGTAAGAATATCAATGATCAAACCACACTTATTGAAATGGACCCTGGAAGTCGTAATACATTTGATCTTGGCTATTTCAAGCAAGTAGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGCATTGCTTAAAAGCTCTACAACAAGATCTATTCTTGCACAACATCTTCAATCAAATGAAAAATTCTTTACTGAATTTGGAAGGTCCATGGAAAAAATGGGCAGAATTAATGTCAAGATTGGGACTGAAGGAGAGATCAGGAAGCATTGTGCATTTATAAATTAA 981 0.3812 MKMGNQSYFKVLIICLIAIIGSTHAQLQPGFYAKSCPKAEQIVLKYVHDHIPNAPSLAAALIRLHFHDCFVKGCDASVLLNSTQTNQAEKDAIPNLTLRGYEFIDTIKSLVEKECPGVVSCADILTLTARDSIHAIGGPYWKVPTGRRDGIISKAADTFTSLPAPFHNLTVLLTLFGNVGLDANDLVLLSGAHTIGVSHCSTISTRLYNFTGKGDQDPDLDNEYAKNLKTFKCKNINDQTTLIEMDPGSRNTFDLGYFKQVVKRRGLFQSDAALLKSSTTRSILAQHLQSNEKFFTEFGRSMEKMGRINVKIGTEGEIRKHCAFIN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1396 326 PANTHER PEROXIDASE 5 325 - -
Mtr4g1396 326 PANTHER PEROXIDASE 25-RELATED 5 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Mtr4g1396 326 Gene3D Peroxidase, domain 2 163 305 - -
Mtr4g1396 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Mtr4g1396 326 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Mtr4g1396 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 Pfam Peroxidase 47 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 Gene3D - 30 326 - -
Mtr4g1396 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g1396 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1396 Mtr-Chr4 24702290 24704395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1396 16 326 Peroxidase AT1G05260 62.179 1.22e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1396 K00430 - gmx:100785662 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1396 4 24702290 24704395 Mtr4g1396 4 24702290 24704395 ECH
Mtr2g2986 2 43538098 43539948 Mtr4g1396 4 24702290 24704395 PCT