Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1394 ATGGTATTTAACCACTTGTCTACCCGAAATGCAAAGAGTCAAGTCCACGAGCAGCTGTACCAGTGTTCAGCGTTACTTCTCCACTCTTTCTTCACTCCTTCATTCTTCTTCAACTTCTTCAAGGCTCGGCGCAACTTGGAAAATTTCCCATCGAATTGTTCAAAGTTGAAGATGTTTGATCAACGAAAGCAGTTCAAGACGAAGTTATGTGCGCTTTATCAGAATGGTCGTTGTAATCGCCAGAACTGTTCTTTTGCACATGGGAATACCGAGCTTCGACGATTTTCATCCAACTATAATGGAAAGAGAGACTATTTAGGTAACAATGACTTGAGGGATAAACTTGATAGAAGGCATTTATCACCTCCAAGATATTCACCGGCTCGAGAGGCAAGAGGTCGGCAGACCATTCGCGAATATAGTCCACTGAGATCTCCAGAGAAAAGAAGTGACAGAAGACATCGGAGAAAACAGGATATCAGTGGCCAAAGTGATATTTCTGGAAGTTTAAAAGTCTCTGAGAGAATTAATGATCCAGTGAAAGAAGAAAAAATGATTTCCTCTGGTTCTAGAAATACTCTTGAGGATCAGCTGAAGAAAGTACACTCTGATATCAAAACTCTTGAGAACCGAAAATCCCAACTATCGGTCTGCCTGGATGAGAGTGTTCAAGAATTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAGGCTCAGTTAAACAAAGAGGATGGGGAGTATAAAAGAATTACTTCAAAAATAAGGAAGTTTGTTCGAATGCACAATCAGAAATTGGAGTTGCAAGATGAACTAAAGAGATCACAGGTCCGACTTCAAAGGTTCGGAGATCAGCTTTTCTCAGACATTTCTAGAATTGGTGCTGATGAGGAAGATTTAAGCGTTGATATTGTAAGCAATGGTGAGAATACTGGTCTTCCTCCAATTACCAAACATAATTTGGAACAGAACGGCGGATCGCCTTGCAGAAAAAGGCTGCATGCAGAACGAGATTCTGTGGAAGAGTTACAACAAGGGCATTCAGTGGAAATAGCAAGAAGCGGAAAGCGGACTCGATTGAGTTTGTATGCTCAATCGATTGACAAGAGTTGTGAGGAGGCCCCTGACAATGGAATTGAAGTATCTAGGCACCAAGATCTTGAAGGAAAACACAAGAAAGGAATATGGAATTCTTCTAACAACATTCATTCAGAAAGGCCGAAGGAATCCAGGATTGAAGTGCCGTCAACCAGCATGGCAGCTCATGTTGATGAGGAAGTTGATATTGAGCATGATAACGGAACTGATACCAATGAAACTGCAAGGACAGAAAATGATAATGGAATGGCATTACAGGTGAAGGGCATATCTCTCATGCTTACCCCAGATTTGATTCCCCGCAACAATTATTCACAGTATGAGGGTAAAAACGAGAATGTGGACGTGGATGGTCTTGATGAAAGAGCAGCAGAAGCGCATGTGGACACGGTCTAA 1491 0.4165 MVFNHLSTRNAKSQVHEQLYQCSALLLHSFFTPSFFFNFFKARRNLENFPSNCSKLKMFDQRKQFKTKLCALYQNGRCNRQNCSFAHGNTELRRFSSNYNGKRDYLGNNDLRDKLDRRHLSPPRYSPAREARGRQTIREYSPLRSPEKRSDRRHRRKQDISGQSDISGSLKVSERINDPVKEEKMISSGSRNTLEDQLKKVHSDIKTLENRKSQLSVCLDESVQELDSLNSRIQELEAQLNKEDGEYKRITSKIRKFVRMHNQKLELQDELKRSQVRLQRFGDQLFSDISRIGADEEDLSVDIVSNGENTGLPPITKHNLEQNGGSPCRKRLHAERDSVEELQQGHSVEIARSGKRTRLSLYAQSIDKSCEEAPDNGIEVSRHQDLEGKHKKGIWNSSNNIHSERPKESRIEVPSTSMAAHVDEEVDIEHDNGTDTNETARTENDNGMALQVKGISLMLTPDLIPRNNYSQYEGKNENVDVDGLDERAAEAHVDTV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1394 496 Gene3D - 60 94 - -
Mtr4g1394 496 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 61 491 IPR045868 GO:0046872
Mtr4g1394 496 MobiDBLite consensus disorder prediction 106 191 - -
Mtr4g1394 496 ProSiteProfiles Zinc finger C3H1-type profile. 64 90 IPR000571 GO:0046872
Mtr4g1394 496 Coils Coil 191 211 - -
Mtr4g1394 496 MobiDBLite consensus disorder prediction 106 161 - -
Mtr4g1394 496 MobiDBLite consensus disorder prediction 175 191 - -
Mtr4g1394 496 Coils Coil 219 253 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr4g1394 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1394 - - aprc:113858008 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1394 4 24670993 24682985 Mtr4g1394 4 24670993 24682985 ECH