Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1376 ATGGAATTGACAAGAACCGGTTGTGCGGTTATTTATGTCATCCTCCTTTGTGCTTTGGCTCAAGGGGGCTCAGAGGGGAAGGAAGATGAGCTTTGTATAGAAGATTCTTCTTTTTTATCTTTCATTCATATTCATATTTATGGAAAACAGGAAGAGAATGTGTGGAAACGTTGCAGGAAAGAATTGATAGAGGGGAACAATGATGTGGAAAGAAGCAGTGACAAGCTTTATTCTTCAAGATACTTGCTAACCAAACATTCTAGTAACGATCATCATCGCCATCGTCGTCATCATGGAACAAATTCAATTGCTGAGTCACCACAAGATTATTTATCAAATATATCACCAATGTCACCGAGTCCGAGTGCTAATAGTCCATCCCCTAGGCATTCATTGGTATCACCAATTCATCTATCAACACCGGCAAGTTCTTCATCACCATCGCCTACTCCTGCTCCGAGTACTCATCCACCAACACCAGCAAGTTCTTCATCACCATCACCATCACCTACTCCTGTTCCGAGTACTGGAGTTGAGTTTTTACCACTCACTCCAGATAAGTCTGGGCCGCCTCCATCGCCACCGCATCAATCGGTTAATCCTTTTCAAATTTTTACACCTATAACAAGTGTTCCAACTCCTTCACCTTCTTTTAACAATCAACACAGAAGCAAGGAAGCAATTATTTTGGCTGCATGTATATCAGGAATCATAATCTTGATAGCATTTGCGCTTTGTTATCGCGAGGCTAAAAGTAGTAAAGTTAAAAAAGATGACGGGCCTTTGCTCGTATTAACCTCAAATGATTATTCTGGAGGTCCACAGAAGGTTGTCCATTCGGGAAATGCGAATACAGAAGAATCTGGTGTTATTATTAACAAAGGAAAGAATCCAGCTAATGTTGGAAATTCGTCCATGAAGGCCGGGGATAATAACAATATATCACTAGTTGAAACAATAACAGCATCAGAAAAAATGGGAGAACAAATAGCAGGAACTTCTTCCGGAAAACCTGCCCCTCCACCCCCTGGTCCGCCGCCAGTTCCTCCTCCACGACCACCTCCTCTTGCGCCTCGTCCTCCACCGCCGCCAAAAGGCGGTCATCCGCCACCTGCTCCTCCCAAGCCAATGGCTGGTAAAAACCAAGTTAAGCCTCATGGACCACTAAATCAAGGAAGTTCTGATGAAGGTGGTGATGCTCCAAAGCCTAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCAAAACCTGATCAAACAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAGGAAATGATGGAGTCTTTATTTGGCACCAACCAGAACAAAAATGAACGTAGAAAAGATTCACCTTCTGTAGATAATGCTGTACATTTTATTCAGATTATTGACCCAAAGAAAGCACAGAATTTATCAATTCTTTTGCGTGCTCTGAATGTGACAACAGCAGAAGTTGTTGATGCACTTAAAGAAGGTAACGAGATCCCTGCGGAGCTTATCCAAACGTTGTTGAAGATGGCACCGACACAAGAAGAGGAACTGAAACTGAGGTTATTCTCTGGAGAACTATCTCAACTAGGCCCAGCAGAGAGGTTTCTCAAAGTATTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTCTCATGTTCATGTTTATTCTTCGAGAAGAGGCCTCGAGCATCAGGGAATCCTTCGCAACATTAGAGGTTGCTTGTGAAGAACTGAGAAAAAGCAGGTTGTTCTTAAAACTACTTGAAGCAGTACTCAAAACCGGCAACCGCATGAACGATGGAACCTACCGTGGAGGCGCTCAAGCATTCAGACTCGACACCCTTTTAAAACTTTCCGACGTAAAAGGAACAGATGGAAAGACAACGCTGTTACACTTCGTGGTTCAAGAAATTATACGTTCAGAAGGAATAAGAGCAGTGAGAACCGAAAGAGCAAGCAAAAGCGTTTCAAGCGTAGGAACAGTGGATGTCGATTATGAAAACGAAGATTCAGAAGATCACTATCGTAGCCTTGGACTTCAAGTAGTTTCAAGCTTAAGCAATGAACTTGAAGATGTTAAAAAAGCAGCATTAATAGACGGTGATGCATTGACTAGCGCGGTTTCAAAACTTGGTCACTCGTTGATTAAGACTCAGGAGTTTTTGAACACTGATCTTAAGAATTTGGAAGAAGACAGTGAGTTTCAAAGTTGTGTAGAAAAGTTTATGGAACATGCGAAAGGTGAGGTGACATGGCTTGTTGAGGAAGAAAAGAAGATCATGTTGTTGGTTAAGAGTACGGCGGATTATTTTCACGGGAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTTTGGTTGTGCGTGACTTCTTGATAATATTGGATAAGGTTTGTAAAGAGGTTAAAGAAGCTGCATTGAAGTCTATGAAAGGTTCTTGGAAGAAAGAGGCTCCGTCAGTGGCAGTGCCATCTTCTCCGGATACACGTCATCATCCAGAGTCACCACAGCCGCCGCCGCCACCATCTGATCTACATAGGCGATTGTTTCCGGCTATTGCGGGGCGGAGAGTAGATTATTCTAGCTCTGATGATGATGAGGAGGATAACTTTTAG 2622 0.4275 MELTRTGCAVIYVILLCALAQGGSEGKEDELCIEDSSFLSFIHIHIYGKQEENVWKRCRKELIEGNNDVERSSDKLYSSRYLLTKHSSNDHHRHRRHHGTNSIAESPQDYLSNISPMSPSPSANSPSPRHSLVSPIHLSTPASSSSPSPTPAPSTHPPTPASSSSPSPSPTPVPSTGVEFLPLTPDKSGPPPSPPHQSVNPFQIFTPITSVPTPSPSFNNQHRSKEAIILAACISGIIILIAFALCYREAKSSKVKKDDGPLLVLTSNDYSGGPQKVVHSGNANTEESGVIINKGKNPANVGNSSMKAGDNNNISLVETITASEKMGEQIAGTSSGKPAPPPPGPPPVPPPRPPPLAPRPPPPPKGGHPPPAPPKPMAGKNQVKPHGPLNQGSSDEGGDAPKPKLKPFFWDKVNAKPDQTMVWHEINAGSFVFNEEMMESLFGTNQNKNERRKDSPSVDNAVHFIQIIDPKKAQNLSILLRALNVTTAEVVDALKEGNEIPAELIQTLLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLESLMFMFILREEASSIRESFATLEVACEELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASKSVSSVGTVDVDYENEDSEDHYRSLGLQVVSSLSNELEDVKKAALIDGDALTSAVSKLGHSLIKTQEFLNTDLKNLEEDSEFQSCVEKFMEHAKGEVTWLVEEEKKIMLLVKSTADYFHGNAGKDEGLRLFLVVRDFLIILDKVCKEVKEAALKSMKGSWKKEAPSVAVPSSPDTRHHPESPQPPPPPSDLHRRLFPAIAGRRVDYSSSDDDEEDNF* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1376 873 MobiDBLite consensus disorder prediction 818 850 - -
Mtr4g1376 873 ProSiteProfiles Formin homology-2 (FH2) domain profile. 395 823 IPR015425 -
Mtr4g1376 873 Gene3D Formin, FH2 domain 401 822 IPR042201 -
Mtr4g1376 873 PRINTS Proline rich extensin signature 120 132 - -
Mtr4g1376 873 PRINTS Proline rich extensin signature 135 151 - -
Mtr4g1376 873 PRINTS Proline rich extensin signature 157 169 - -
Mtr4g1376 873 PRINTS Proline rich extensin signature 174 195 - -
Mtr4g1376 873 PRINTS Proline rich extensin signature 201 217 - -
Mtr4g1376 873 PRINTS Proline rich extensin signature 333 358 - -
Mtr4g1376 873 MobiDBLite consensus disorder prediction 328 405 - -
Mtr4g1376 873 SUPERFAMILY Formin homology 2 domain (FH2 domain) 408 808 - -
Mtr4g1376 873 PANTHER FORMIN-RELATED 1 870 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr4g1376 873 MobiDBLite consensus disorder prediction 833 848 - -
Mtr4g1376 873 MobiDBLite consensus disorder prediction 336 378 - -
Mtr4g1376 873 SMART it6_source 395 812 IPR015425 -
Mtr4g1376 873 MobiDBLite consensus disorder prediction 85 202 - -
Mtr4g1376 873 Pfam Formin Homology 2 Domain 400 797 IPR015425 -
Mtr4g1376 873 MobiDBLite consensus disorder prediction 146 175 - -
Mtr4g1376 873 PANTHER FORMIN-LIKE PROTEIN 1 870 - -
Mtr4g1376 873 MobiDBLite consensus disorder prediction 103 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1376 Mtr-Chr4 24244972 24249794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1376 391 805 FH2 protein (formin) Gene Family AT5G67470 49.764 7.70e-121 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1376 - - lja:Lj3g3v2888350.1 844.343