Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1356 ATGATAGAAATAGAAGATTTGGAAGAGAATGACAATGAAGGAATAGAGGTTCCCTATTTTGATTTTGAGAGTATACTAGTGGCCACAAATGACTTCTCATATGCAAATAAACTTGGCAAAGGTGGTTTTGGACCAGTTTACAAGGGTAAATTTGGTGGTCAAGAAATTGCGATAAAGAGACTCTCAAGTGTTTCATCACAAGGTTCACTGGAATTCAAGAATGAGGTTGTTTTGATAGCTGATGTGTATTATCTGCAAGTGCACGCTAAACTTCAACATCGTAACCTTGTTAAATTACGCGGCTGCTCCTGTGTAAAAGGAGAGGAAAAAGTTCTGCTTTATGAGTATATGCGTAACAAGAGCTTGGACTTATTGATATTCGATTCGACAAAAAGCGTAATTTTGGATTGGCCAATGCGGTTTGAAATAATTCTCGGAATTGCCCGTGGACTGCTCTATCTTCATCAAGACTCAAGACTTAGAGTTATTCACCGAGATTTGAAAACTAGCAACATTCTTCTAGATGAGGAGATGCAACCAAAAATCTCAGATTTTGGAATAGCAAGAACATTTGCAGGCAAAGAAACAGAGGCAAGCACAGAGAGGGTTGTTGGTACATACGGGTACATGTCTCCTGAGTATGCGTTGGATGGATATATTTCAACAAAGTCAGATGTTTTCAGTTGGCGTTGTCTTGCTTGA 702 0.3889 MIEIEDLEENDNEGIEVPYFDFESILVATNDFSYANKLGKGGFGPVYKGKFGGQEIAIKRLSSVSSQGSLEFKNEVVLIADVYYLQVHAKLQHRNLVKLRGCSCVKGEEKVLLYEYMRNKSLDLLIFDSTKSVILDWPMRFEIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGIARTFAGKETEASTERVVGTYGYMSPEYALDGYISTKSDVFSWRCLA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1356 233 SUPERFAMILY Protein kinase-like (PK-like) 15 229 IPR011009 -
Mtr4g1356 233 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 229 - -
Mtr4g1356 233 SMART serkin_6 32 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1356 233 Gene3D Transferase(Phosphotransferase) domain 1 117 233 - -
Mtr4g1356 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mtr4g1356 233 PIRSF ILK 15 232 - -
Mtr4g1356 233 Pfam Protein kinase domain 34 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1356 233 ProSiteProfiles Protein kinase domain profile. 32 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1356 233 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 12 229 - -
Mtr4g1356 233 Gene3D Phosphorylase Kinase; domain 1 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1356 Mtr-Chr4 23656265 23663742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1356 3 229 Receptor kinase-like Gene Family AT4G05200 59.211 2.27e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g1356 Pkinase 5.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1356 - - mtr:MTR_0148s0080 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1356 4 23656265 23663742 Mtr4g1356 4 23656265 23663742 ECH