Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1353 ATGTCCAGTAACATGAGAACTCTTTTTCTCTTTTTCAATCTTTATACTTCTTGGTTGCTAATATGCTCTTCTCAGCTTTGTTTAGCAGGAGATACTTTGAACATTGGCCAGAAGATATTAAGCAATGAAACCTTAAACAACCTTGTTTCAGCTGGAAAAATGTTTGAACTTGGCTTCTTTACTCCAAGCAACAATGGTAACTCACAAAGATACTTAGGTATATGGTATCACATTCAAGAGGAGTCACAACAACCTCAAAAACAAACAGTGGTGTGGGTTGCCAACAGAGACAACCCTGTAGCTGTTGATTCCATTGGAGTTTTCCAAATAGCAGAGGATGGGAATCTCGTAGTTTTAGACACATCCGGTAATGAAAAAAGGTACTGGTTTTCTAATTCCAGTTCCAAAATCAAAGACTCTTCTAGTTTTTCACCTAAAATCAGAACAGTGAAACTCATGGATTCTGGTAACCTTGTTTTATATGACGATGAACTCATGGAAGTGAAACTGTGGGAGAGCTTTGAAAATCCAACTGACACATTCCTACTTGGAATGAATATGGATAAGAATTTGAGTCTGACTAGTTGGAAAGGTGCTGATGACCCAAGCAGTGGGGATTTCACTTTTAAGACAATGGACAACCGTTTCATCATCTTAAACCGAAGTGAAATTCATTGGGAGAGCGAAGAGCACGGAAAGCATGATCAATTGGACGACATCAGCTTTGAGGTTTATAATTTGTTGACCAACTTCAGTTTTCTTGTTTATAATTCGTCAAACAAATTCAGTTCACCTGAAAAACGGAACAGATCAGTAATTCGTAACGAACAGTATAACAATAAAAGATTGTTCCTCAATTCCACAGGTGTGATACAGTGGGTGGAAGATGATTTGCTAGTTATATGGAAGCAGCCAAGAAGCAAATGTTTAACATATAATGCTTGTGGAAACTTTGCTAGCTGTAATGACGATGATAGCGTTTGCAAATGTTTACCAGGATTCTACAATGATAACCAGGGAGAGGAAGATTCTTCACGACATTGTACGAGGAGAAAAACAACATTCTGTACTGAAAATGACACGAAGTTCTTGAACTTGACCATGATTAAAACAGGAAGGCCAGATATAAAGGTAACCGTGGAATCTCAAAAAAAATGCGCAGATTTGTGCCATGGGATGTGTCCACAGTCACAGTGCCAGGCTTACTCATATGCTCAAGTCCCTGATAAGCAGCAGCGTGGTCTTATTCCTTCAAACTGTTGGATCTGGACACACAGTTTAACTACTCTTAAAGAAGAGTATACTAGTTGGGATGATGATCGTAGACTCATTATCCTAGTTGATAAATTAGACATAGAACCAACTCCAAGAACTTGTGAGCCCTGTGGTACAAACACAGTCCCTTATCCTCTCAGTACCGGACCCAACTGTGGAGACCTCGCATACTTCAACTTTAGATGCAATACCACAACAGGCCAAGGTCACCTTAGCTTCACGGCCGCTAACAACGTTAGTTACAGAGTTATTCGTGTTGATCAAAGTAGAAGAAAGCTTACCCTTCATAATGAGGATTATTCCTTTACTAGTTGTGATGAAGGATCTAAACGGACAGGAAGTCTGAACGTTTCTTTACCGTTTCGCATGACCAGTGACAATACGTGCTCTGAACAACTTGAAGTTAGTTGGGAACCACCTTCCGAACCCATCTGTAATAACTCTGTTGATTGCCATGGCTGGAACCATTCTACTTGTAGTAAAGGAAAGAGGTGTCTTTGCAATGCAAACTATAACTGGAATGGCGAATCTTTAAATTGTACCAAAACACCTAGATCCTCTCCTACTGCTACAAAAGAGCCAAACAGAGAGAAGTCTAAAAGCTTATTCTATTTGATTCTGGGCTTATCTCTTTTCGGCGTAGTTGCTCTAGTTGGCATCATTATTTTTGCTTATGCATGCAGAGGAAGAATAGTGCATATGATTAAGCAAGATAAGGATAGCGTACGAAGAAATATCAGAGGGCGATTTTACGACAGTGAAAGACATGTGAAGGATTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGAAGGAATAGAGGTTCCGTATTTCGATTTCGAGAGCATACTAATGGCGACAGATGACTTTTCCGATGCAAATAAACTTGGAAAAGGTGGTTTTGGGCCAGTTTACAAGGGTAAGCTTGGTGGTCAAGAAATTGCAGTAAAGAGACTTTCAAATGTTTCATCACAAGGCTTACAGGAATTTAAGAATGAGGTTGTTTTGATTGCTAAACTTCAACATCGAAACCTTGTTAAATTACGGGGCTACTGCGTAAAAGGAGAGGAAAAAATTCTGCTTTATGAGTATATGCCTAACAAGAGCCTGGACTTAATGATATTCGATTCGACAAAAAGCGTAATTTTGGATTGGCCAATGCGGTTTGAAATAATTCTCGGAATTGCTCGTGGACTGCTCTATCTTCATCAAGACTCAAGACTTAGAGTTATTCACCGAGATTTGAAAACTAGCAACATTCTTCTAGACGAGGAGATGCAACCGAAAATCTCAGATTTTGGACTAGCAAGAATAGTTGGAGGGAAAGAAACTGAGGCAAGCACAGAGAGAGTTGTTGGTACATACGGGTACATGTCTCCTGAGTATGCCTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGCTTGAGATCATCAGCGGAAAAAAAAACACCGGATTCTATCGGTCTAAAGAGATTTCAAGCCTTTTGGGTTATGCTTGGAGACTATGGAGAGAAGATAAATTGCAAGATTTAATGGACCCAACTCTAAGTGATACTTACAACGTTAACCAATTTATTAGGTGTTCACAAATTGGACTCTTATGCGTACAAGACGAACCAGATGATCGTCCACACATGTCAAATGTGGTGACCATGCTCGACAATGAAACTACAACCCTCTTAACACCTAAACAACCAACCTTTTTTACACGTAATAAAGACCTCTCAAGCACAGCTTCTTCAAGTTTGCAGCTTGATAGTATCATTGAAGAAGGACGATGA 3081 0.3953 MSSNMRTLFLFFNLYTSWLLICSSQLCLAGDTLNIGQKILSNETLNNLVSAGKMFELGFFTPSNNGNSQRYLGIWYHIQEESQQPQKQTVVWVANRDNPVAVDSIGVFQIAEDGNLVVLDTSGNEKRYWFSNSSSKIKDSSSFSPKIRTVKLMDSGNLVLYDDELMEVKLWESFENPTDTFLLGMNMDKNLSLTSWKGADDPSSGDFTFKTMDNRFIILNRSEIHWESEEHGKHDQLDDISFEVYNLLTNFSFLVYNSSNKFSSPEKRNRSVIRNEQYNNKRLFLNSTGVIQWVEDDLLVIWKQPRSKCLTYNACGNFASCNDDDSVCKCLPGFYNDNQGEEDSSRHCTRRKTTFCTENDTKFLNLTMIKTGRPDIKVTVESQKKCADLCHGMCPQSQCQAYSYAQVPDKQQRGLIPSNCWIWTHSLTTLKEEYTSWDDDRRLIILVDKLDIEPTPRTCEPCGTNTVPYPLSTGPNCGDLAYFNFRCNTTTGQGHLSFTAANNVSYRVIRVDQSRRKLTLHNEDYSFTSCDEGSKRTGSLNVSLPFRMTSDNTCSEQLEVSWEPPSEPICNNSVDCHGWNHSTCSKGKRCLCNANYNWNGESLNCTKTPRSSPTATKEPNREKSKSLFYLILGLSLFGVVALVGIIIFAYACRGRIVHMIKQDKDSVRRNIRGRFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESILMATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSNVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCVKGEEKILLYEYMPNKSLDLMIFDSTKSVILDWPMRFEIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIVGGKETEASTERVVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKKNTGFYRSKEISSLLGYAWRLWREDKLQDLMDPTLSDTYNVNQFIRCSQIGLLCVQDEPDDRPHMSNVVTMLDNETTTLLTPKQPTFFTRNKDLSSTASSSLQLDSIIEEGR* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1353 1026 Gene3D - 25 175 IPR036426 -
Mtr4g1353 1026 ProSiteProfiles Protein kinase domain profile. 716 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1353 1026 Pfam Protein tyrosine and serine/threonine kinase 720 985 IPR001245 GO:0004672|GO:0006468
Mtr4g1353 1026 CDD B_lectin 39 177 IPR001480 -
Mtr4g1353 1026 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 201 IPR036426 -
Mtr4g1353 1026 ProSiteProfiles Bulb-type lectin domain profile. 30 173 IPR001480 -
Mtr4g1353 1026 Pfam D-mannose binding lectin 89 191 IPR001480 -
Mtr4g1353 1026 Gene3D Transferase(Phosphotransferase) domain 1 791 999 - -
Mtr4g1353 1026 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 24 1017 - -
Mtr4g1353 1026 CDD STKc_IRAK 722 988 - -
Mtr4g1353 1026 SMART serkin_6 716 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1353 1026 Gene3D Phosphorylase Kinase; domain 1 682 790 - -
Mtr4g1353 1026 SMART blect_4 36 177 IPR001480 -
Mtr4g1353 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Mtr4g1353 1026 SUPERFAMILY Protein kinase-like (PK-like) 698 1014 IPR011009 -
Mtr4g1353 1026 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 1017 - -
Mtr4g1353 1026 Pfam S-locus glycoprotein domain 260 336 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1353 Mtr-Chr4 23577037 23581233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1353 704 1008 Receptor kinase-like Gene Family AT4G11530 58.306 1.10e-120 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g1353 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1353 - - mtr:MTR_0148s0080 2087.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1353 4 23577037 23581233 Mtr4g1353 4 23577037 23581233 ECH