Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1350 ATGAAGAAAAAACCACTGTTCTCCCTTTGTCTTCTCATCATCTTATTCTATTTACACACCTACCCTTCACTTTCTGCTTTGACCAGCATCTCATCAAACCAATCTCTTTCTGGTGATCAAACTCTTGTCTCCAATGATGGAAACTTTGAATTGGGTTTCTTCAATAAAGGTAATTCCTCTAAGAACTACATAGGCATGTGGTACAGAAATATATCACCAAAGACATATGTTTGGGTAGCAAATAGAGATGATCCAGTTTCTGATAAAAATTCTTCCAAGTTTACTATATCTGATGGTAATTTAGTTCTCTTGGATCAGTCTCAAAATCTAGTTTGGTCAACAAATTTGAGTTCTCCTAGTTCAAATTCTGTAGTTGCTGTTCTTTTAGATGGTGGTAATCTTATATTAAGTAATAGGCTTAATGCGTCGGTAACAGACGCTCTTTGGCAGAGTTTTGATTTTCCATCAGATACATGGCTTCCTGGTGGAAAAATTAAACTTGATCATATAACAAAGAAGCCTCAATATCTCACTGCTTGGAAGAACAGTGAAGATCCAGCAACAGGTTTATTCTCTCTTGAACTAGACCCTAATGGAACCGATTCATATTTGATTCTTTGGAATAAAACTCAACAGTATTGGACAAGTGGTCCTTGGAATGGACAAATATTCAGTTTGGTTCCTGAAATGAGGTCAAACTATGCCTTTAATTTCAGTTTCGTGACTAATGAGAATGAGAGCTACTTCACATATTCTATGTACAACAATGATACTATATCTCGTTTCGTGATGGATATCTCGGGGCAGATCAAGCAACTTACCTGGCTGGAAAGTACTCAGCAGTGGAATTTGTTTTGGTCACAGCCAAGAGGACAGTGTGAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATCAGAACTCAAAGCCATACTGCAATTGTTTGTATGGTTATGAACCAAAGTCACAATCTGATTGGGTTCTTGAAGATTACTCACATGGGTGTGTGAAAACAAACAAGTTTCAATGTGAGGTATCTTCAAATCCTTCTACTGGTGACAAGGATAGGTTCTTAACCGAACTCAATTTGGCTTTGCCGGAACATGCACAACCTGTTGTGGAAGCTGGTGTAAGTGAGGATTGTGAGTCAAAATGTCTGAACAACTGTTCCTGCACTGCATATGCTTATAACAGTAGTGGTTGTTTCATTTGGATCGGAGAACTCTTGAATCTGCAACAGCTTTCTCAGGATGATAGTAATGGACAGACATTGTTTCTCAAACTTGCAGCATCTGAGTTTCATGATTCTAAAAGCAACAAAGGAACAACTATTGGTATTGTTGCTGGTGCTGTTGGTGGTATAGGGGTTCTCCTTGTTCTTGTTCTAATTGTTGTGATTAGGCGAAAGAGACTAGCTGGAGCAAGAACTTCTGTGGAGGGCTCATTGATAGCATTTGCATACAGAGATTTGCAAAATGCCACAAAGAATTTCTCAGATAGACTCGGAGGAGGAGGTTTTGGTTCTGTCTTCAAAGGAACATTACCTGATTCAAGTGTCATAGCAGTGAAGAAACTTGAAAGCATTAGCCAAGGCGAGAAGCAGTTTCGAACAGAAGTTAGTACTATTGGGACTGTCCAACATGTCAACCTTGTTAGGCTTCGTGGTTTCTGTTCCGAAGGTGACAAAAGGCTTCTGGTTTATGATTACATGCCAAATGGGTCTTTGGATTCACATCTGTTTCAGAACTCCAAGGTATTGGAGTGGAAAGTAAGATACCAAATTGCTCTGGGAATAGCTAGGGGATTGACATATCTTCATGAAAAGTGTAGAGACTGTATCATTCACTGCGACGTGAAGCCAGAAAACATTCTCATAGATTCTGATTTTTGTCCAAAAGTTGCAGACTTCGGCCTTGCAAAGCTTGTCGGAAGGGACTTCAGCCGGGTCCTCACTACCATGAGAGGAACAAGAGGCTATCTAGCTCCAGAGTGGATTTCAGGAGTTGCTATAACCGCTAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTCGAGCTAGTGTCAGGTAGAAGAAACTCCGATCCTTCTGAAGATGGCCATGTTAGATTCTTTCCTACCTTAGCTGCAAACCTAGTACACCAAGGTGGGAATGTGATTAGCTTATTGGACTCTAGGTTGGAGGGAGATGCTGATGCTGAAGAGATCACTAAAGTCATCAAAATTGCTTCTTGGTGTGTTCAAGATGATGAAGCTCATAGGCCATCGATGGGTCAGGTAGTTCAAATCCTCGAAGGTGTTCTGGACGTTTCTTTGCCTCCAATTCCTAGATCCCTTCAAGCTTTTGTTGACGACCACGAGGACATTGTTTTCTTCACTGATTCAAGCTCCACTCATAGCTCACAAGTGAAGAGCAATGTCTCAACAGCCTCCTCTCAAGCCAAAAACAACATCTCATCTACTAGCACCTAG 2472 0.407 MKKKPLFSLCLLIILFYLHTYPSLSALTSISSNQSLSGDQTLVSNDGNFELGFFNKGNSSKNYIGMWYRNISPKTYVWVANRDDPVSDKNSSKFTISDGNLVLLDQSQNLVWSTNLSSPSSNSVVAVLLDGGNLILSNRLNASVTDALWQSFDFPSDTWLPGGKIKLDHITKKPQYLTAWKNSEDPATGLFSLELDPNGTDSYLILWNKTQQYWTSGPWNGQIFSLVPEMRSNYAFNFSFVTNENESYFTYSMYNNDTISRFVMDISGQIKQLTWLESTQQWNLFWSQPRGQCEVYAFCGAFGSCNQNSKPYCNCLYGYEPKSQSDWVLEDYSHGCVKTNKFQCEVSSNPSTGDKDRFLTELNLALPEHAQPVVEAGVSEDCESKCLNNCSCTAYAYNSSGCFIWIGELLNLQQLSQDDSNGQTLFLKLAASEFHDSKSNKGTTIGIVAGAVGGIGVLLVLVLIVVIRRKRLAGARTSVEGSLIAFAYRDLQNATKNFSDRLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGDKRLLVYDYMPNGSLDSHLFQNSKVLEWKVRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILIDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSDPSEDGHVRFFPTLAANLVHQGGNVISLLDSRLEGDADAEEITKVIKIASWCVQDDEAHRPSMGQVVQILEGVLDVSLPPIPRSLQAFVDDHEDIVFFTDSSSTHSSQVKSNVSTASSQAKNNISSTST* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1350 823 PIRSF SRK 1 816 IPR024171 GO:0004674
Mtr4g1350 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Mtr4g1350 823 Gene3D Phosphorylase Kinase; domain 1 464 570 - -
Mtr4g1350 823 CDD B_lectin 33 155 IPR001480 -
Mtr4g1350 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 220 IPR036426 -
Mtr4g1350 823 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Mtr4g1350 823 ProSiteProfiles Protein kinase domain profile. 496 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1350 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 5 794 - -
Mtr4g1350 823 Pfam D-mannose binding lectin 75 181 IPR001480 -
Mtr4g1350 823 Gene3D - 25 152 IPR036426 -
Mtr4g1350 823 CDD STKc_IRAK 502 766 - -
Mtr4g1350 823 Gene3D Transferase(Phosphotransferase) domain 1 571 771 - -
Mtr4g1350 823 Pfam PAN-like domain 353 411 IPR003609 -
Mtr4g1350 823 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 794 - -
Mtr4g1350 823 CDD PAN_AP_plant 351 430 - -
Mtr4g1350 823 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Mtr4g1350 823 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Mtr4g1350 823 SMART serkin_6 496 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1350 823 SMART ntp_6 353 429 IPR003609 -
Mtr4g1350 823 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Mtr4g1350 823 SUPERFAMILY Protein kinase-like (PK-like) 482 798 IPR011009 -
Mtr4g1350 823 SMART blect_4 33 155 IPR001480 -
Mtr4g1350 823 MobiDBLite consensus disorder prediction 799 823 - -
Mtr4g1350 823 Pfam Protein kinase domain 500 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1350 Mtr-Chr4 23537543 23540402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1350 478 774 Receptor kinase-like Gene Family AT5G20050 44.127 1.85e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g1350 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1350 - - gmx:100305421 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1350 4 23537543 23540402 Mtr4g1350 4 23537543 23540402 ECH