Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1334 ATGGTTAGAGCTCCTTATTTTGACAAAAATGGAACAAAAAAAGGTGCATGGAGTAAGGAAGAGGATGAGAGACTTATTGCTCACATTGAGAGACATGGCCATCCTAATTGGCGTCAACTTCCCAGAGTTGCAGGTTTGGCAAGATGTGGAAAGAGTTGTAGGTTGCGTTGGATGAATTATCTGAGGCCAAATCTAAAACGAGGGAACTATACACAGAAGGAGGAACAAATGATCATGGAATTGCATAAAAAGCATGGAAATAAATGGTCTCTTATAGCTGAAAATCTACCTGGAAGATCTGACAACGAGATAAAGAATTACTGGCACAGCCACCTACAGAAATTCTCAAAGTGCAATGACTCTAAGCTCACACAAGAGATTGAAAGTCCAAAAACGACAAGTGAAGTTGTTAGTGTTGATTCTCACCACATTTTGGAAAGTTCATTTTCAATGTCTTCTGAAATGTCCTACCCTAATAATAAAGTCAATTCCCCTTCAATTTCCTCTAGTCATGTAGAATCAAACATGGACTTCTACAAAAGAGATCAAGATAGTGTTGTTTCTTGGGAAACATGGGATGGATTCAGTAATAATTTTTGGACTGAACCGTTTGTTTATGAAAATGCATTAGGTCAAGATTACTTTCCCATTTCATGTTATGAAGAAGAGGTAGAGGATCCATTTGTTTTATGGTAG 696 0.3764 MVRAPYFDKNGTKKGAWSKEEDERLIAHIERHGHPNWRQLPRVAGLARCGKSCRLRWMNYLRPNLKRGNYTQKEEQMIMELHKKHGNKWSLIAENLPGRSDNEIKNYWHSHLQKFSKCNDSKLTQEIESPKTTSEVVSVDSHHILESSFSMSSEMSYPNNKVNSPSISSSHVESNMDFYKRDQDSVVSWETWDGFSNNFWTEPFVYENALGQDYFPISCYEEEVEDPFVLW* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1334 231 Gene3D - 69 113 - -
Mtr4g1334 231 CDD SANT 69 112 IPR001005 -
Mtr4g1334 231 PANTHER MYB TRANSCRIPTION FACTOR 1 222 - -
Mtr4g1334 231 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 222 - -
Mtr4g1334 231 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr4g1334 231 CDD SANT 16 61 IPR001005 -
Mtr4g1334 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr4g1334 231 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr4g1334 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr4g1334 231 Gene3D - 7 66 - -
Mtr4g1334 231 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr4g1334 231 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr4g1334 231 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mtr4g1334 231 SMART sant 66 114 IPR001005 -
Mtr4g1334 231 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1334 Mtr-Chr4 22957837 22960253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1334 1 114 MYB Transcription Factor Family AT5G16770 66.667 8.97e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr4g1334 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1334 K09422 - gmx:100781032 317.005