Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1315 ATGACGATTGGTTCCTTCTTCAACAAAGCCTCCAGGGCCCTCACCACTCACCCTTTCTCTTCCAACTTTCTGCTTCTTTGTACTATCAGTGGTGGAGGTGTGGTGGCACTCTCAGAATCAAAATCAGAAGCTGAACGTCCTAATATTGAAGATCAGCAGCCCCGAAAAACGAAAGTCGTGGTCCTTGGAACTGGATGGGCTGCTGCCAGTTTCCTTAAGGGTTTGGATGGTTCATTATATGATGTTCAAGTTGTTTCGCCTCGTAACTACTTTGCATTTACTCCCTTATTACCGAGTGTCACTTGTGGGTCAGTTGAAGCACGGAGCATCGTAGAACCGGTCCGAAACATCATTAAAAAGAGAGATGGAGAAATCAAATTTTGGGAGGCTGAATGTGTCAAGATCGATGCTGCAGACAAAAAGGTTGTTTGTCGGTCTAATATTGAAAACTTAGTGGGAAGTGGTGAGTTTTCTCTGGACTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTAAATACTTTCAATACCCCTGGTGTTAAGGAGAACTGTCATTTTCTGAAGAATGTCGAGGATGCTCAGAAGATCAGACTGTCTGTAATAGATTGTCTTGAGAAGGCTGTTCTTCCTAGTCAATCTGAAGAGGAGCAAAGGTCAAATCTTCATTTTGTAATTGTTGGAGGAGGTCCAACTGGTGTTGAATTTGCAGCTGAACTGCATGATTTTATTCAAGAAGATTTGATCAAATTATATCCAACCGTTCAAGATAAAATAAAGATCACGTTAATTCAATCTGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCGTTTGCTGAGAAGAAGTTTACAAGAGATGGTATAGAAGTTCAAACTGGATGCCGCGTTATGAGTGTTGATGACAAGGAAATTACAGTGAAGGTGAAATCAACGGGAGAGGTTTGCTCGGTTCCCCATGGATTGATTATCTGGTCTACTGGCATTTCTACTCTTCCAGTTATAAGAGATTTTATGGAAGAAATTGGTCAGACTAAAAGGCATGTACTGGCAACCGATGAATGGTTGAGAGTGAAGGAATGTGAAGATGTGTTTGCCATTGGTGATTGTTCATCAATAAATCAACGTAAAATCATGGATGATATCTTGGACATATTTAAGGCTGCAGACAAAAATAACTCCGGTACCTTAACTGTAGAAGAATTCGAAGAAGTGATGGATGATGTAATCTTAAGATATCCTCAAGTTGAATACTATCTAAATAAGAAACATATACTTGATTTGAGGGTTCTGTGGAACGACCCACAAGGAAATGAAAGAAAAGAAATAGACATAGAAGGGTTTAAGCTGGCCCTTTCTGTTGCAGATTCCCAGGTGAAGACTCTTCCAGCAACTGCACAGGTTGCTGCGCAACAAGGTGCATACCTAGCAAGTTGCTTTAATCGCGTTGATGATACTGAAGAGCATCCAGAAGGACCTCGTCGATTTTCAGGATCTGGACATCATCGGTTTCGTCCCTTTCGGTATAAGCATTTTGGGCAATTTGCTCCACTGGGTGGAGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATCGGTCACAGCACTCAATGGCTTTGGTATTCAGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTATTTGGTCATGTCTGATTGGGCTAGAAAATTCGTATTTGGGAGGGATTCGAGTCGGGTTTAA 1734 0.4193 MTIGSFFNKASRALTTHPFSSNFLLLCTISGGGVVALSESKSEAERPNIEDQQPRKTKVVVLGTGWAAASFLKGLDGSLYDVQVVSPRNYFAFTPLLPSVTCGSVEARSIVEPVRNIIKKRDGEIKFWEAECVKIDAADKKVVCRSNIENLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKNVEDAQKIRLSVIDCLEKAVLPSQSEEEQRSNLHFVIVGGGPTGVEFAAELHDFIQEDLIKLYPTVQDKIKITLIQSGDHILNMFDERISSFAEKKFTRDGIEVQTGCRVMSVDDKEITVKVKSTGEVCSVPHGLIIWSTGISTLPVIRDFMEEIGQTKRHVLATDEWLRVKECEDVFAIGDCSSINQRKIMDDILDIFKAADKNNSGTLTVEEFEEVMDDVILRYPQVEYYLNKKHILDLRVLWNDPQGNERKEIDIEGFKLALSVADSQVKTLPATAQVAAQQGAYLASCFNRVDDTEEHPEGPRRFSGSGHHRFRPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVMSDWARKFVFGRDSSRV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1315 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 377 IPR023753 GO:0016491
Mtr4g1315 577 SUPERFAMILY FAD/NAD(P)-binding domain 221 375 IPR036188 -
Mtr4g1315 577 Gene3D - 437 577 - -
Mtr4g1315 577 Gene3D - 46 405 - -
Mtr4g1315 577 SMART efh_1 382 410 IPR002048 GO:0005509
Mtr4g1315 577 PANTHER NADH DEHYDROGENASE 6 577 IPR045024 GO:0003954|GO:0006116
Mtr4g1315 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Mtr4g1315 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Mtr4g1315 577 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B2, MITOCHONDRIAL-RELATED 6 577 - -
Mtr4g1315 577 SUPERFAMILY FAD/NAD(P)-binding domain 56 274 IPR036188 -
Mtr4g1315 577 SUPERFAMILY EF-hand 336 460 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1315 Mtr-Chr4 22325691 22331297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1315 5 577 Chloroplast and Mitochondria Gene Families AT4G21490 62.284 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1315 K03885 - gmx:100793566 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1315 4 22325691 22331297 Mtr4g1315 4 22325691 22331297 ECH