Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1308 ATGACAGATCAAGAAATGACAGATATGCATGAACATACCAACATGATTGGCTCAGATGATATGCTTGGTAAATTGGTCAAGAGATTCTTTGTTCTAAGGAGGGGTTTGGATCCCAAAAAAAAATTGAAAAAAGAAAATGGTAGTCTTATTGTACATGATCAAACAAGGGTAGGATGCAAGGCACTGTTGTATATCAAGAAAAGTGAAGATAGGTGGACTGTTTCTAGATTTGTAAGAGACCATAATCATGAACTATTTTCCCCAAACAGTTCACACTTTCTTAGAGTACATAGAAGCAAAACCAAAGTGCAAAAAAAACTTATTGATGTGCTTGATGATTCTGGTATAGGCCCTAGTAAAATAGCATCAGTGTTATGTAGCGAGAGTGGTGGTGTTGATAATGTTGGATTTAGCCAACAAGATGTTATTAATTATTTAACTGTGAAGAGACAAAAACAATTAGAAAATGGAGATGCTCAGCTGATGTTATCGTACTTTAAGAATTGTCAGTTGAAGAATCCTGGGTTTTTCTATGCATTTCAAATGGACGCAGAAGGTAAATTAGCAAATTGCTTTTGGGTTGATTCAAGGTCTAGAATGGCTTACAAATATTTTGGTGATGTGGTGACTTTTGATCCAACATACTTAACAAATAAATACCTAATGCCCTTTGTTCCATTCACGGGAGTTAATCATCACCAACAGTCTATACTTTTTGGTTGTGCTCTGTTATGGGATGAAACTGAAGAGAGTTTTGTTTGGTTGCTACGTACTTGGTTAGAAGCAATGGATGGAGTTAGTCCTAAAACTATTATCACTGATCAAGACACTTCTATTTCTAATGCAGTTGCACAGGTTTTTCCAGAGGTGAATCATCACTATTGTATGTGGCATATTCAGAAGAAAGTTCCAGAGTACTTGAACCAAATCTATCATGAACATAGTGAGTTTAAAAATCAATTTCAGAAGTGCATTCGCCAAACTATTGAAGATAGGGAGGATTTCTGA 1008 0.3562 MTDQEMTDMHEHTNMIGSDDMLGKLVKRFFVLRRGLDPKKKLKKENGSLIVHDQTRVGCKALLYIKKSEDRWTVSRFVRDHNHELFSPNSSHFLRVHRSKTKVQKKLIDVLDDSGIGPSKIASVLCSESGGVDNVGFSQQDVINYLTVKRQKQLENGDAQLMLSYFKNCQLKNPGFFYAFQMDAEGKLANCFWVDSRSRMAYKYFGDVVTFDPTYLTNKYLMPFVPFTGVNHHQQSILFGCALLWDETEESFVWLLRTWLEAMDGVSPKTIITDQDTSISNAVAQVFPEVNHHYCMWHIQKKVPEYLNQIYHEHSEFKNQFQKCIRQTIEDREDF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1308 335 Pfam FAR1 DNA-binding domain 26 86 IPR004330 -
Mtr4g1308 335 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 328 IPR031052 GO:0006355
Mtr4g1308 335 Pfam MULE transposase domain 208 302 IPR018289 -
Mtr4g1308 335 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 23 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1308 Mtr-Chr4 22260758 22264359 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g1308 MULE 4.2e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1308 - - lang:109336948 482.641