Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1287 ATGGGTAGCAGCAATAAGGAGAAGGAGAGAAACATTGAGTTTATGTTTAACGATGATGATGTAGAGGAACAATATGAAAAGATAGAGAGCGAGAGTAGTAGTGATAATGATGATGATGATGATCATTCAGTTCAGCTTCAGTCTTTCACTTCTCAGCAATGGCCTCAAAGCTACAAAGAGACTACAGATTCTTACACAATTGCTACAGCACCAAATTTTGTGTCAATTCTACGAGGGCCAAGTTCTATTTATTCAAGTTTTAGCAATCGTTCAAAGAGTGACTTAGACATAGATGGAAAGACTCCTTTTCTATCAGGTCTTGAAGGTACTACTCAATCCACATGGTGGGAGAAACGTTCGACGCAAAATCTTGTTGGAGAAATGCCTCTTGGTTATGGTTGCAGCTACACTCAAACAGTTTTCAATGGGATTAATGTGATGGCTGGAGTGGGCCTTCTGTCTACACCTTATACAGTGAAACAAGCTGGTTGGATGGGCTTGGTCCTGATGCTTATTTTTGCATCTGTTTGTTGTTATACAGCCACCCTTATGAGACACTGCTTTGAAAGCAGAGAAGGACTCACTAGCTATCCAGATATAGGAGAAGCTGCATTTGGTAGATATGGCCGTATTTTTGTATCTATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCTGGAACGTCCTTAGATATAGGCGGTCTCCATTTAGATTCCATGCACTTGTTTGGAGTTCTGACTGCATTAGTTATTCTACCCACTGTTTGGTTGAAGGATCTCCGAGTAATCTCGTATCTATCAGTTGGAGGGATTGCAGCAACAATATTGATTATTATATCTGTGTTCTCTGTCGGGACGACTGTTGGATTCCATCATACTGGTCGAGTGGTGAATTGGAGCGGCATTCCATTTGCTATTGGTGTTTATGGGTTTTGCTTTGCAGGACATTCAGTCTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAGTATACCAAAGCATTGATAACATGTTTTGTTTTGTGTATTTTGATATATGGAAGCGTTGCGGTCATGGGATTTCTCTCCTTTGGCGATGACACTCTGTCTCAGATAACATTGAATATGCCAGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTGACTAAATATGCTTTGTTGATGAATCCACTGGCGAGGAGTCTAGAGGAGTTGCTGCCAGAGAGAGTTTCAAGTACTTATTGGTGCTTTATTCTTCTTAGAACAACACTTGTTGCATCTACAGTTTGTGCTGCTTTTCTGATTCCTTTTTTTGGACTTGTGATGGCTTTGATCGGTTCACTCTTCAGTATGCTTGTGTCGGTGGTAATGCCCAGTTTATGCTTTTTAAAAATTGTCGGGAAGAAGGCTACAAGGTCACAGGTTATCGTGAGCGTTATAATTGCTGCTGCCGGAATCGTTTGTGGACTACTTGGAACATATTCCTCTCTGATGGATATTGTCAACAGTTACTAA 1563 0.4044 MGSSNKEKERNIEFMFNDDDVEEQYEKIESESSSDNDDDDDHSVQLQSFTSQQWPQSYKETTDSYTIATAPNFVSILRGPSSIYSSFSNRSKSDLDIDGKTPFLSGLEGTTQSTWWEKRSTQNLVGEMPLGYGCSYTQTVFNGINVMAGVGLLSTPYTVKQAGWMGLVLMLIFASVCCYTATLMRHCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTGLFPGTSLDIGGLHLDSMHLFGVLTALVILPTVWLKDLRVISYLSVGGIAATILIIISVFSVGTTVGFHHTGRVVNWSGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQYTKALITCFVLCILIYGSVAVMGFLSFGDDTLSQITLNMPAGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPERVSSTYWCFILLRTTLVASTVCAAFLIPFFGLVMALIGSLFSMLVSVVMPSLCFLKIVGKKATRSQVIVSVIIAAAGIVCGLLGTYSSLMDIVNSY* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1287 520 Gene3D Amino acid/polyamine transporter I 134 519 - -
Mtr4g1287 520 Pfam Transmembrane amino acid transporter protein 135 511 IPR013057 -
Mtr4g1287 520 MobiDBLite consensus disorder prediction 1 43 - -
Mtr4g1287 520 MobiDBLite consensus disorder prediction 1 17 - -
Mtr4g1287 520 PANTHER OS05G0424000 PROTEIN-RELATED 29 518 - -
Mtr4g1287 520 MobiDBLite consensus disorder prediction 18 38 - -
Mtr4g1287 520 PANTHER AMINO ACID TRANSPORTER AVT1A 29 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1287 Mtr-Chr4 21700179 21707037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1287 1 455 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.426 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1287 K15015 - gmx:100790344 820.846