Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1282 ATGGGTTGTTGTGTCTCAACGAGCAGTCGAAGTACTTGTAGCAGCGGGAGCAATGGAGAGATGATAACTCCATCTTGCTTCGAAATTTGTTTCTGTGGACAAAAGAGAGCAAGGAGAACATTTTCTGATCATGCTATTTCTCTACACCAATTATCATCCTTACCTAGCAGGATTTTCACTAATGGAAAGAGTCGGGGTTCGTGCATATTTACACAGCAGGGTCGCAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATACGATATTTTGTGGTGTCTTCGATGGTCATGGTCCACAAGGTCATCTGGTTGCGCGTAAAGTGAGGGATACATTGCCAGTAAAATTGCTTTCATTTTGGCATTCTCTTGAATCGAAACAAAATAGGTCAGACAAAACTTGCTTCAAACGGAACATAACACCAGACTGTGGAGAGTCTGAGAAGGATTGTTCTGCTGAGGATAAACTGAACTCCACTTGGAGAGAAGCTTTCATAAAAGCATACAAGACCATGGACAAAGAGCTTAGGTCTTATCCAAATCTAGACTGCTTCTGTAGTGGGAGCACATCTGTGACTGTAGTAAAGCAGGGTTCAAATCTCTTCATGGGATATATTGGGGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTGCAAGATGAGCCTGAAGTTCCTAGGGTGTGGCTGCCTTTTGATGACGCACCAGGGTTAGCAATGGCTAGGGCGTTTGGAGATTTCTGCTTGAAGGAGTATGGTGTCATTTCTATACCTGAATTTTCTCACCGGCTTCTCACAGACAGAGATCAATTCATTGTTCTTGCTTCAGATGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCATCGGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAAATTCAGCTGCTCGGGAATGGAAACTCAAGTACCCGACTTCAAAAATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGATGAACAGGGCTTCTCTTCTGCAACCATTCAGAGCAACCATTCTGGGAATCCAGTTGAATCAGATGATGGACAAAAGTCAGAGCCATCTTTGAGAAGGAACTTTACTGTGAGATCATCAGAAGAAAACGAGACCAACGGAGCAGTGTCTGTCGATGTTGAAGATGAAGCAGCATCAGGTGAAGATCAAAACTGGTTAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAAGAAAGATCAAACTCTTGA 1413 0.4352 MGCCVSTSSRSTCSSGSNGEMITPSCFEICFCGQKRARRTFSDHAISLHQLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFWHSLESKQNRSDKTCFKRNITPDCGESEKDCSAEDKLNSTWREAFIKAYKTMDKELRSYPNLDCFCSGSTSVTVVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPVESDDGQKSEPSLRRNFTVRSSEENETNGAVSVDVEDEAASGEDQNWLGLEGVTRVNSLVQLPRFSEERSNS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1282 470 MobiDBLite consensus disorder prediction 381 404 - -
Mtr4g1282 470 Gene3D - 59 372 IPR036457 -
Mtr4g1282 470 MobiDBLite consensus disorder prediction 380 444 - -
Mtr4g1282 470 MobiDBLite consensus disorder prediction 405 419 - -
Mtr4g1282 470 CDD PP2Cc 65 370 IPR001932 -
Mtr4g1282 470 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Mtr4g1282 470 Pfam Protein phosphatase 2C 142 340 IPR001932 -
Mtr4g1282 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Mtr4g1282 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Mtr4g1282 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Mtr4g1282 470 SMART PP2C_4 50 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1282 Mtr-Chr4 21624662 21629744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1282 1 466 PP2C-type Phosphatase Gene Family AT1G03590 68.499 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1282 - - gmx:100813306 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3070 2 44378041 44381920 Mtr4g1282 4 21624662 21629744 PCT