Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1271 ATGGAGACTGTTCTTTCCAATCACTCTCCACCTTCGGTCTTCAAGGGTGTGAGCAAGGAAGAAGAAGAATCATTGCTTGGACAAATTGAAATATGGAAATACATGACACAATTCACAGACTCTTTTGCTCTAAAAGCAGTTGTGGAGCTACGTATAGCTGATATTATAGACCGTCAGTGTAAACCGCTATCCTTGACTGAAATTGTGCAGAATCTTGAAGATGCACCCTCTCCTGATTCCACGCTCCTTTTAAGAGTAATGAGAGTGATGGTTCGTAGAAAGATTTTCAGCGCAGAAAAATCAGAAACCGGCGAAATTCTCTACGGCTTGACACGTGCATCGAAATGGATTCTACAAGACACAAAAGTAACATTGGCACCATTGGTATTGCTAGAGACTCACCCAATTCATATGAACCCTTTTAACTTTATGAGTGATATTGTAAAAGAAGGCACAAAAAATGGCACTGCTTTCTTTAGGTGTCATGGTTATGACCAATTTGAAATGGCTAGTGTGGACCCAAAATTCAATGAGTTGTTTAACAAAGGACAAGCTTGCACAACTGGATTTGTGTTTAGAGCTGTTATTGCTGGATACAAAGATGGATTTAACCAAATTCAAACATTGGTTGATGTTGGTGGCGGTATCGGAGGATCGATGTCTGAGATTGTTAAAGCTTACCCTCATATCCAAGGTATTAATTTTGATTTGCCTCATGTTGTTTCAACAGCACCCAAGTATGATGGCATCACCCATGTTGGAGGAGACATGTTTGTTTCTATTCCTAGTGCTGATGCTATTTACATCAAGTGGATTCTTCATGACTGGAGTGACGACCATTGCGTAAAGATATTGAAGAACTGTAGGAAGGCAATACCGGAGAAAACTGGAAAGGTGATAATATTGGATCATGTATTGGACCCAGAAGGAGATGAACCATTTACTGATATTGGCATAGCATTTGACATGATATTGTTTGCACACAACTCTGGTGGTAAGGAAAGGACTGAAGAGAACTGGAAATACTTATTCAAAGAGACGGGATTCCCTCGTTACAACATCATCAAAATCAATGCTTTGCTATCCATCATTGAAGCATTTCCAATCTAA 1110 0.3964 METVLSNHSPPSVFKGVSKEEEESLLGQIEIWKYMTQFTDSFALKAVVELRIADIIDRQCKPLSLTEIVQNLEDAPSPDSTLLLRVMRVMVRRKIFSAEKSETGEILYGLTRASKWILQDTKVTLAPLVLLETHPIHMNPFNFMSDIVKEGTKNGTAFFRCHGYDQFEMASVDPKFNELFNKGQACTTGFVFRAVIAGYKDGFNQIQTLVDVGGGIGGSMSEIVKAYPHIQGINFDLPHVVSTAPKYDGITHVGGDMFVSIPSADAIYIKWILHDWSDDHCVKILKNCRKAIPEKTGKVIILDHVLDPEGDEPFTDIGIAFDMILFAHNSGGKERTEENWKYLFKETGFPRYNIIKINALLSIIEAFPI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1271 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
Mtr4g1271 369 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Mtr4g1271 369 CDD AdoMet_MTases 208 306 - -
Mtr4g1271 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Mtr4g1271 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Mtr4g1271 369 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 20 368 - -
Mtr4g1271 369 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Mtr4g1271 369 PANTHER O-METHYLTRANSFERASE 20 368 IPR016461 GO:0008168
Mtr4g1271 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
Mtr4g1271 369 Gene3D - 15 117 IPR036388 -
Mtr4g1271 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1271 Mtr-Chr4 21181357 21184847 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1271 42 355 Monolignol Biosynthesis Gene Families AT5G54160 38.438 2.15e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1271 K22588 - gmx:100812768 616.305