Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1268 ATGGAGACTGTTCTTTCCAAACACTCACCACCTTCTGCCTTCAAGGGTGTGAGCAAGGAAGAAGAAGAATCATTGCTTGGACAAATTGAAATATGGAAATACATGACACAATTTACAGACTCTTTTGCTCTAAAAGCTGTCGTGGAGCTACGCATAGCCGACATTATAGACCGTTATGGCAAACCATTATCCTTAACTCAAATTGTGCAGAATCTTGAAGATGCACCCTCCCCTGATTCCACTCTACTTTTAAGAGTAATGAGAGTCATGGTTCGTAGAAAGATTTTCAGTGCAGAAAAATCAGAAACCGGCGAAATTCTCTATGGCTTGACACGTGCATCGAAATGGATCCTACAAGACACAAAAATGACATTGGCACCAATGTTGTTGCTAGAGAATCACCCTTTTCATTTGAACCCTGCTAACTTTATTAGTGAAATTATAAAAGAAGGCACCAAAAATGGCACTGCTTTCTTTAGGTGTCATGGTCATGAACAATTTGAAATGACGGGGTTGGACTCAAAATACAATGACTTGTTCAACCAAGGTATGGTTTGCACCGCTAGAATTGTGTCGAGGGCTGTTATTGCTGGATACAAAGACGGGTTTAACCAAATTAAGTCTTTGGTTGATGTTGGTGGGGGTATCGGAGGATCTCTCTCCGAGATTGTTAGAGCTTATCCTCACATTCAAGCTATTAACTTTGATTTGCCTCATGTGGTTTCAACGGCCCCTAATTTTGATGGTATCACCCATGTTGGAGGAGACATGTTCGTGTCAGTTCCTAGTGCTGATGCTATTTACATGAAGTGGATTCTTCATGACTGGAGCGACGACCATTGCATAAAGATATTGAAGAACTGTAGAAAGGCAATACCAGAGAAAACAGGAAAGGTGATCATTGTGGATCATGTATTGGACCCAGAAGGAAATGAACCATTTACCGACACTGGGATAGCATTTGACATGATGTTGCTTGCTCACAATGCTGGTGGTAAAGAAAGAACTGAAGAGAACTGGAAATACCTATTCAACGAGACAGGATTCCCTCGTTACAACATCATCAAAATCAATGCTCTGCCATGCATCATTGAGGCATTCCCAATCTAA 1110 0.4117 METVLSKHSPPSAFKGVSKEEEESLLGQIEIWKYMTQFTDSFALKAVVELRIADIIDRYGKPLSLTQIVQNLEDAPSPDSTLLLRVMRVMVRRKIFSAEKSETGEILYGLTRASKWILQDTKMTLAPMLLLENHPFHLNPANFISEIIKEGTKNGTAFFRCHGHEQFEMTGLDSKYNDLFNQGMVCTARIVSRAVIAGYKDGFNQIKSLVDVGGGIGGSLSEIVRAYPHIQAINFDLPHVVSTAPNFDGITHVGGDMFVSVPSADAIYMKWILHDWSDDHCIKILKNCRKAIPEKTGKVIIVDHVLDPEGNEPFTDTGIAFDMMLLAHNAGGKERTEENWKYLFNETGFPRYNIIKINALPCIIEAFPI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1268 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Mtr4g1268 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 120 IPR036390 -
Mtr4g1268 369 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Mtr4g1268 369 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 20 368 - -
Mtr4g1268 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
Mtr4g1268 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Mtr4g1268 369 Pfam O-methyltransferase domain 147 349 IPR001077 GO:0008171
Mtr4g1268 369 Gene3D - 14 117 IPR036388 -
Mtr4g1268 369 PANTHER O-METHYLTRANSFERASE 20 368 IPR016461 GO:0008168
Mtr4g1268 369 CDD AdoMet_MTases 209 306 - -
Mtr4g1268 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1268 Mtr-Chr4 21073120 21081805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1268 42 355 Monolignol Biosynthesis Gene Families AT5G54160 38.318 4.48e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1268 K22588 - gmx:100812768 664.07