Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1241 ATGAATAGCTCTGGGGGTGGCAGTAGTAACGGAGGAGGTGTAGGGATGATGATGGGTTACAGTAAATCATCACCATTCACAGTGTCTCAGTGGCAGGAACTTGAACATCAAGCTTTGATCTTTAAATATATGGTTGCTGGTCTTCCTGTTCCACCTGATCTTGTCCATCCTATTCATTCCAGCTTTCACTCTCTTTCTTCTAATAATTTCTTTCACCACCCTATTCCTACCTTGAGTTACTGTTCCTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGAAGATGTAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCGAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGACATCCACTGTGACATCGCTGACTGTCGCTGGTGGCAGCAGCAGAGCTGGTAACTTCCAGAACATTCCCACAACAAATGCATTTGGTAGTGTTCAAAATACTACAGGTTCTGGAACCGACCGTGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTATCTTCAAGGTCTTAAATCTGAGGGTGGAGAACATAGCTTCTTTGCAGAAGCTTCAAGAGGAGACAACAAGGGTCTCCAAATGGAGTCGCAGCTGGAAAACACATGGCCTTTGATGTCAACTAGAGTTGCCTCTTTTTCTGCATCAAAATCAAGCTGTAATAATTCCATGTTGCAGAGTGATTATCCCCAACATTCATTTTTATCTAGTGAATATGGATCTGGAGAAGCTGTGAAGGAAGAGGGCCAGCCTCTTCGACCCTTTTTCAGAGAATGGCCTAAGAGCAGAGAGTCATGGTCTGGTTTGGAAGATGAGAGATCCAACCAAACAGCATTCTCCACAACTCAACTTTCAATATCCATTCCTATGTCATCGTCTGAATTCTCTGCCACAAGCTCTCAGTCACCACACGATAACTAG 1014 0.4536 MNSSGGGSSNGGGVGMMMGYSKSSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVHPIHSSFHSLSSNNFFHHPIPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSTSTVTSLTVAGGSSRAGNFQNIPTTNAFGSVQNTTGSGTDRADYHLDTIPYGIPSKEYRYLQGLKSEGGEHSFFAEASRGDNKGLQMESQLENTWPLMSTRVASFSASKSSCNNSMLQSDYPQHSFLSSEYGSGEAVKEEGQPLRPFFREWPKSRESWSGLEDERSNQTAFSTTQLSISIPMSSSEFSATSSQSPHDN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1241 337 PANTHER GROWTH-REGULATING FACTOR 5 23 330 - -
Mtr4g1241 337 MobiDBLite consensus disorder prediction 302 337 - -
Mtr4g1241 337 MobiDBLite consensus disorder prediction 121 140 - -
Mtr4g1241 337 MobiDBLite consensus disorder prediction 296 337 - -
Mtr4g1241 337 PANTHER - 23 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mtr4g1241 337 Pfam WRC 90 132 IPR014977 -
Mtr4g1241 337 ProSiteProfiles QLQ domain profile. 25 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr4g1241 337 ProSiteProfiles WRC domain profile. 89 133 IPR014977 -
Mtr4g1241 337 SMART QLQ_2 24 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr4g1241 337 Pfam QLQ 25 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1241 Mtr-Chr4 18408995 18413033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1241 25 132 GRF Transcription Factor Family AT3G13960 64.220 7.64e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mtr4g1241 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1241 - - gmx:100787226 484.952