Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1237 ATGGAGTGCCAGCTTCACTTTTTTGCCCAAATTCAGAGAGAATTCTTTGCATTCTTACCTTACCTACCTACAACAATGTCAAGAGCCAAACAGGTTATTACATGCAAAGCTGCTGTATGCTGGGGGCTTGGAAAGCCTGTGACAGTGGAAGAGATACAAGTAGATCCACCAAAGGCAAAAGAAGTTCGAGTTAAGATGCTATGTTCAAGTGTATGCCACACAGACATATCAAGCCTTAAAGGATTTCCACATAATCAATTTCCTCTAGCACTTGGACATGAAGGAATTGGTGTTGTAGAGAGTATTGGTGATCAAGTAACAAATCTAAAAGAAGGGGATTTCATAATTCCAACATACATAGGCGAGTGTGAAGAATGTGAGAATTGTGTTTCTGGGAAAACCAATTTGTGTTTGACACATCCTGTGAGATTGACTGGTCTAATGCCAGATAACACTTCAAGGTTGTCTGTCCGAGGCCAAACATTATACCATGTTTTGAGTTGTGCTTCATGGTCGGAATATGTGGTGGTTGATATCAATTACCTTCTTAGAGTTGATCCAAACATTAATCTAGCTTATGCTAGTTTCATCTCATGTGGGTTTTCAACTGGTTATGGAGCTTGTTGGAAAGAAGCCAATATTGAAAGTGGTTCAACTGTAGCTGTTTTTGGTCTTGGGGCTGTTGGATTAGGGGCAATAAGCGGGGCTAAGATGATGGGAGCAAGTAAGATAATTGGGGTTGACAAAAACGAGATGAAGAGAGAAAAAGGAGAAGCTTTTGGGATGACCCATTTTATAAATTCTAATGATTCTGATAAATCTGCTTCAGAATTGGTTAAAGAGTTAAATGGAATGGGTGTAGATTATTGCATTGAATGTACTGGAGTAGCACCTTTGCTTACTGAATCTTTGGAAGCCACAAAAATGGGAACAGGTAAGGCAATTGCAGTTGGTATAGGAGCTGAACTTGTTGTACCGTTTGGACTTCTTGCCATTCAATTTGGTAGAACCTTAAAAGGTTCTGTTTTTGGAGGCATAAAAGCCAAATCAGACCTTACCACCATAGCTAACAAATGTCAAAAACAGGAATTCCCTCTCCATGAACTTTTCACCCATGAGGTCCCTTTGGTTGATATTGACAAAGCATTTGAGTTATTGAAAGATCCCACTTGTGTCAAAGTTGTTATCAAGATGTGA 1197 0.3952 MECQLHFFAQIQREFFAFLPYLPTTMSRAKQVITCKAAVCWGLGKPVTVEEIQVDPPKAKEVRVKMLCSSVCHTDISSLKGFPHNQFPLALGHEGIGVVESIGDQVTNLKEGDFIIPTYIGECEECENCVSGKTNLCLTHPVRLTGLMPDNTSRLSVRGQTLYHVLSCASWSEYVVVDINYLLRVDPNINLAYASFISCGFSTGYGACWKEANIESGSTVAVFGLGAVGLGAISGAKMMGASKIIGVDKNEMKREKGEAFGMTHFINSNDSDKSASELVKELNGMGVDYCIECTGVAPLLTESLEATKMGTGKAIAVGIGAELVVPFGLLAIQFGRTLKGSVFGGIKAKSDLTTIANKCQKQEFPLHELFTHEVPLVDIDKAFELLKDPTCVKVVIKM* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1237 398 Pfam Zinc-binding dehydrogenase 227 347 IPR013149 -
Mtr4g1237 398 Gene3D - 38 393 - -
Mtr4g1237 398 PANTHER ALCOHOL DEHYDROGENASE-RELATED 30 397 - -
Mtr4g1237 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 190 358 IPR036291 -
Mtr4g1237 398 Pfam Alcohol dehydrogenase GroES-like domain 60 184 IPR013154 -
Mtr4g1237 398 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 92 106 IPR002328 GO:0008270|GO:0016491
Mtr4g1237 398 PANTHER ALCOHOL DEHYDROGENASE 30 397 - -
Mtr4g1237 398 CDD liver_alcohol_DH_like 33 397 - -
Mtr4g1237 398 SMART PKS_ER_names_mod 42 396 IPR020843 GO:0016491
Mtr4g1237 398 Gene3D - 204 341 - -
Mtr4g1237 398 SUPERFAMILY GroES-like 29 215 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1237 Mtr-Chr4 18301093 18305301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1237 61 352 Monolignol Biosynthesis Gene Families AT2G21730 26.689 5.85e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1237 K00121 - gmx:100798341 609.757