Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1233 ATGGCTTCTGGATCATCCGGTCGCGGTAACCCCGGCTTCGATTTTGCATCCGATGACATCTTGTGCTCATACGAAGACTTTTCCAACCGGGATTCCAATTCCAATAATCACAACGATCCTTCCAATTCAACCAAGGATTTTCACAAATCAAGGGTAGCAAGGACATCTGTTTTTCCTGCTCCTGCCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCAACTGTTGAGAAGAGTATGAAGAAATATGCTGACAATCTTATGCGATTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATCAGATCTGATTTAAATCGTGACCACGGTGACCAAGACTCAAAGCTCAAATCTCTTGAAAAGCACGTTCAGGAAGTTCACAGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCCGAGACGCAGAAAGAGCTAGCTAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGACAAATCTTCACCTTCTACAACAGACCCTAAAAAAGCTGATAATGCATCTGATACAAACAACCAGCAGTTAGCTCTTGCTCTTCCTCATCAAATTGCTCCTCAGCCACAGCCTGCAGGACCCCCGCCAGCCCAAGCTCCACCACCAAATGTGAATCAACCCACTCAACAACCCTCTTATTACATGCCGCCTGCTCCTGCAGCGTCTCAGCTCCCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAAGACATGTCTCGGGTGGCTCAACAACCTACACCATCTCAAATAAATCCCCCCACACCTGTGCAACAATTTTCTCAGTATCAGCAGCAGCCCCCGCCGCAGCAGCAGCAATGGTCTCAGCAGGTCCAACAATCCTCAATGCAACCTCAAATGAGACCCCCCTCGTCTACTGTGTATCCTCCATACCAGCCCAGCCAAGCATCAAATCCATCACCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAACCAGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGGGGAACTGGTAGAACAGTTCCCCAACAGCCTCCACCCCAGCAAATCAAGGGTTCATTCCCTTCCCAACCAGGTGACGTGTATGGAGCTAGTGGGACCCACCCGGCACTCCCTCCTCCTCCTGGTAATGCATATATGATGTATGATGGTGGTGAGGGAGGAAGGGCACATCATCCACCACCCCAACCCTCTCATTTTGCTCAATCTGGATATCCTCAAACAAGTGCTTCCCTTACGAACCCCAATCTCTTGGTTCGAAATCCTAGCCAGTCACAGTTTGTACGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTCAGGGGTGACCACGTGGCAAGCGTGATCCAAAGGATGGAGGAGAGTGGACAAACCATAGATTTCAACTCTGTTCTTGACAGGTTGAATGTGCATAGCTCTGTTGGTCCCCAGAGAGGGTGGTCAGGGTGA 1584 0.476 MASGSSGRGNPGFDFASDDILCSYEDFSNRDSNSNNHNDPSNSTKDFHKSRVARTSVFPAPAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEIRSDLNRDHGDQDSKLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDKSSPSTTDPKKADNASDTNNQQLALALPHQIAPQPQPAGPPPAQAPPPNVNQPTQQPSYYMPPAPAASQLPQNQYMPSDQQYRTPQLQDMSRVAQQPTPSQINPPTPVQQFSQYQQQPPPQQQQWSQQVQQSSMQPQMRPPSSTVYPPYQPSQASNPSPTETLPNSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPPPQQIKGSFPSQPGDVYGASGTHPALPPPPGNAYMMYDGGEGGRAHHPPPQPSHFAQSGYPQTSASLTNPNLLVRNPSQSQFVRNHPYNELIEKLVNMGFRGDHVASVIQRMEESGQTIDFNSVLDRLNVHSSVGPQRGWSG* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1233 527 MobiDBLite consensus disorder prediction 27 50 - -
Mtr4g1233 527 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 525 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 27 41 - -
Mtr4g1233 527 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 525 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 250 323 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 216 236 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 441 455 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 165 199 - -
Mtr4g1233 527 Coils Coil 132 168 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 331 387 - -
Mtr4g1233 527 MobiDBLite consensus disorder prediction 214 455 - -
Mtr4g1233 527 Pfam UBA-like domain (DUF1421) 473 517 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1233 Mtr-Chr4 17929264 17934946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1233 472 527 Trihelix Transcription Factor Family AT5G14540 36.923 1.15e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1233 - - gmx:100782994 677.937