Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1207 ATGACAGGGAAATTGATGCCGGATGCTTCATTGAACCCAACAAGTTTGGTTGTGGGTGCCATTGCAAGTGCTTTTGCTCTGTCTTCTGTTTTGTACATTGCATGGGACATCTCTGGTGGACATGTCAATCCTGCTGTGACCTTTGCAATGGCTGTGGGAGGACATATTAGTGTCCCAACTGCTCTCTTTTATTGGGTTGCTCAACTTATTGCCTCTGTTATTGCCTGCCTTTTCCTCAAAGTCATTGTTGTTGGCATGCATGTGCCAACATATTCAATTGCAGAAGAAATGACAGGATTTGGAGCATCAATATTAGAGGGTATACTAACATTTGTGTTAGTGTACACAATTTACGCTGCAAGGGACACTAGGCGTGGTCAAGTAAGTTCAACCGGAACACTTGTAATTGGTTTAATTGCAGGAGCAAGTGTTTTAGCAGCAGGTCCATTCTCTGGCGGGTCAATCAACCCTGCATGTGCTTTTGGATCTGCTTCCATTGCCGGAACATTCAGAAATCAAGCTGTCTATTGGGTTGGTCCTTTGATTGGTGCTGTTGTTGCTGGTCTTCTTTATGACAATGTGTTGTTCCCTTCTCAGAATTCAGATTGTATTAGAGGGGTTTCAGATGGAACAGTTAGGGTGTAG 645 0.4372 MTGKLMPDASLNPTSLVVGAIASAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVIACLFLKVIVVGMHVPTYSIAEEMTGFGASILEGILTFVLVYTIYAARDTRRGQVSSTGTLVIGLIAGASVLAAGPFSGGSINPACAFGSASIAGTFRNQAVYWVGPLIGAVVAGLLYDNVLFPSQNSDCIRGVSDGTVRV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1207 214 PANTHER AQUAPORIN-8 3 212 IPR034294 -
Mtr4g1207 214 Pfam Major intrinsic protein 15 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 SUPERFAMILY Aquaporin-like 12 201 IPR023271 -
Mtr4g1207 214 Gene3D Glycerol uptake facilitator protein. 1 207 IPR023271 -
Mtr4g1207 214 PRINTS Major intrinsic protein family signature 23 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 PRINTS Major intrinsic protein family signature 60 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 PRINTS Major intrinsic protein family signature 105 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 PRINTS Major intrinsic protein family signature 137 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 PRINTS Major intrinsic protein family signature 174 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g1207 214 PANTHER AQUAPORIN TIP5-1-RELATED 3 212 - -
Mtr4g1207 214 ProSitePatterns MIP family signature. 41 49 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1207 Mtr-Chr4 17285931 17287115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1207 4 210 Major Intrinsic Protein MIP AT3G47440 63.285 4.17e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1207 K09873 - gmx:100801448 355.525