Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1200 ATGAAACCTTTCGTTGCAACTCTTTTTGTCATTTTGGTCGTGTGTGATGTGTCTCTGGCAAGAACAGAGAAGAACGAGAATGAGAAGATTACTTACATAGTACATGTTGCCAAATCCATAATGCCAACAAGCTTCAAACACCATTCAATCTGGTACAAATCAATTCTTAAGTCGGTGTCCAATTCAACTAAAATGTTATACACCTATGATAATGCAATCAATGGATTCTCGACAAGTCTAACAATCAAAGAACTTCAGTTGCTAAAGAGCCAAATTGGGATTCTAAAGGTGACACGAGATAAACAGTACAAACTCCTTACAACTCGAACACCAGAATTCCTCGGGCTCGATAAAATTGCCAGTGTCTTCCCCACAACAAATAAGAGCAGTGACGTAGTTGTGGGACTCCTTGATACAGGTGTTTGGCCTGAAAGTAAGAGCTTTGATGATACAGGATATGGGCCGATCCCCCGCAGTTGGAAAGGAAAGTGTGAAACAGGTACCAATTTCGCAACCTCAAATTGTAATAAGAAATTAATTGGTGCCAGGTTCTATTCAAAGGGCATCGAGGCATTTACAGGATCAATTGATGAAACCATCCAGCCTAGATCTCCTCGAGATGATATCGGCCATGGAACACACACAGCGAGTACAGCTGCAGGATCTCCGGTGAGCAACGCAAATCTTTTTGGCTACGCTAATGGGACTGCACGTGGAATGGCCGCTGGTGCTAGAGTTGCTGTCTATAAGGTTTGTTGGACAGTATTTTGTAGCATTTCTGATATACTAGCTGCAATGGACCAGGCCATTGCCGACAACGTCAATGTTCTTTCATTGTCACTTGGAGGTAGGTCAATTGATTACAAGGAAGACAACCTCGCAATTGGAGCATTTGCAGCAATGGAGCATGGGATTTTAGTTTCATGTTCTGCAGGAAACTCTGGTCCTAATCCTTTGAGTGTTACCAATGTAGCACCTTGGATTACAACGGTCGGAGCTGGCACCCTCGATCGAGATTTCCCTGCATACGTTAGTCTTGGAAATGGAAAAAAATATCCAGGTGTGTCTCTTTCTAAAGGAAATTCTTTGCCCGATACTCATGTAACATTCATATATGCAGGAAATGCAAGCATCAATGACCAAGGTATTGGTACATGCATTTCGGGTAGCTTGGATCCAAAAAAAGTTTCAGGAAAGATTGTGTTTTGTGATGGTGGAGGGAGTTCTAGGACAGGAAAAGGAAACACGGTAAAGTCTGCTGGTGGTTTGGGCATGGTCTTAGCCAACGTTGAGAGCGATGGAGAAGAACTCAGGGCAGATGCCCATATTTTGCCTGCAACTGCCGTGGGCTTCAAAGATGGTGAAGCTATCAAGAAATACATATTTTCTGATCCAAAACCAACTGGCACAATTTTGTTTCAAGGAACAAAGCTCGGGGTTGAGCCGTCACCTATTGTTGCAAAATTCAGCTCACGAGGCCCCAATTCATTAACACCGCAAATATTGAAGCCTGATTTTATTGCTCCAGGTGTTAACATCTTAGCATCATATACAAGGAATACGAGCCCCACAGGTATGGATTCAGATCCTAGGCGTGTAGATTTCAACATTATCTCAGGCACATCCATGTCATGCCCTCATGTAAGTGGATTAGCGGCTTTGATTAAGTCAATTCATCCAAACTGGAGCCCAGCTGCCATTCGATCTGCTTTGATGACAACAACTTATACGACTTACAAGAACAATCAGAAGTTATTGGACGGTGCTAGCAATAAGCCAGCAACTCCGTTTGATTTTGGTGCAGGACATGTCGACCCTGTTTCTGCGCTAAATCCTGGACTTGTCTATGATTTGACTGTGGATGACTATTTGAGCTTCCTCTGTGCATTGAACTACTCATCTAATGAAATTGAAATGGTGGCAAGGAGAAAGTACACATGTGACCCAAAGAAACAATATAGTGTAGAAAATCTTAACTACCCTTCCTTTGCAGTGGTTTTTGAGGATGAGCATGGTGTAGAGGAGATCAAACACACACGAACTCTTACCAATGTGGGTGTAGAAGGAACATACAAGGTATCTGTTAAATCAGATGCTCCATCCATCAAGATATCAGTTGAACCAGAAGTGTTAAGTTTTAAGAAAAATGAGAAAAAGTTGTACACAATTTCATTTTCGTCAGCAGGTTCAAAACCAAATAGCACTCAAAGTTTTGGAAGTGTGGAATGGTCAAACGGAAAAACTATTGTAAGAAGTCCTATTGCCTTTAGTTGGAAATTATAA 2283 0.4196 MKPFVATLFVILVVCDVSLARTEKNENEKITYIVHVAKSIMPTSFKHHSIWYKSILKSVSNSTKMLYTYDNAINGFSTSLTIKELQLLKSQIGILKVTRDKQYKLLTTRTPEFLGLDKIASVFPTTNKSSDVVVGLLDTGVWPESKSFDDTGYGPIPRSWKGKCETGTNFATSNCNKKLIGARFYSKGIEAFTGSIDETIQPRSPRDDIGHGTHTASTAAGSPVSNANLFGYANGTARGMAAGARVAVYKVCWTVFCSISDILAAMDQAIADNVNVLSLSLGGRSIDYKEDNLAIGAFAAMEHGILVSCSAGNSGPNPLSVTNVAPWITTVGAGTLDRDFPAYVSLGNGKKYPGVSLSKGNSLPDTHVTFIYAGNASINDQGIGTCISGSLDPKKVSGKIVFCDGGGSSRTGKGNTVKSAGGLGMVLANVESDGEELRADAHILPATAVGFKDGEAIKKYIFSDPKPTGTILFQGTKLGVEPSPIVAKFSSRGPNSLTPQILKPDFIAPGVNILASYTRNTSPTGMDSDPRRVDFNIISGTSMSCPHVSGLAALIKSIHPNWSPAAIRSALMTTTYTTYKNNQKLLDGASNKPATPFDFGAGHVDPVSALNPGLVYDLTVDDYLSFLCALNYSSNEIEMVARRKYTCDPKKQYSVENLNYPSFAVVFEDEHGVEEIKHTRTLTNVGVEGTYKVSVKSDAPSIKISVEPEVLSFKKNEKKLYTISFSSAGSKPNSTQSFGSVEWSNGKTIVRSPIAFSWKL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1200 760 Pfam Subtilase family 129 602 IPR000209 GO:0006508|GO:0008236
Mtr4g1200 760 SUPERFAMILY Subtilisin-like 105 614 IPR036852 GO:0004252|GO:0006508
Mtr4g1200 760 MobiDBLite consensus disorder prediction 200 220 - -
Mtr4g1200 760 Pfam Peptidase inhibitor I9 31 105 IPR010259 -
Mtr4g1200 760 CDD Peptidases_S8_3 103 572 IPR034197 -
Mtr4g1200 760 Gene3D Peptidase S8/S53 domain 131 623 IPR036852 GO:0004252|GO:0006508
Mtr4g1200 760 Pfam Fibronectin type-III domain 657 755 IPR041469 -
Mtr4g1200 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 758 IPR045051 -
Mtr4g1200 760 CDD PA_subtilisin_like 343 471 - -
Mtr4g1200 760 Pfam PA domain 392 457 IPR003137 -
Mtr4g1200 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Mtr4g1200 760 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 758 - -
Mtr4g1200 760 Gene3D - 627 758 - -
Mtr4g1200 760 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Mtr4g1200 760 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Mtr4g1200 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Mtr4g1200 760 ProSiteProfiles Serine proteases, subtilase domain profile. 113 610 - -
Mtr4g1200 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 105 IPR037045 -
Mtr4g1200 760 Gene3D - 337 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1200 Mtr-Chr4 16941230 16943681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1200 4 758 Subtilisin-like Serine Gene Family AT5G67360 62.880 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1200 - - gmx:100801866 1025.39