Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1189 ATGAAAGAAGTAGAAAAAGAAGGAAGCTTCTGCTCACAGAGTAAAAAAAACGATGTGTTCATCAGCTTTAGAGGCGAGGACACACGCAGCAACTTCACTAGCCATCTTCATGCAGCTCTATGTCGAACCAAAGTTAAAACCTACATCGACTACAACCTTAAAAAAGGTGACTATATCTCAGAAACACTCGTGAAAGCAATACAAGATTCCTACGTATCTATTGTTGTTTTCTCAGAAAACTATGCATCCTCAACATGGTGCTTAGATGAGCTTACACATATGATGAAATGCTTAAAAAACAACCAGATCGTTGTTGTACCTGTGTTCTATAACGTAGATCCTTCCCACGTGCGGAAGCAGAGTGGTAGTTACATGGTTGCTTTTGAGAAGCATGTGTGTAATCTCAACCACTTTAATAAGGTCAATGATTGGCGTGAAGCTTTAGCTCAAGCAACTAGTTTGGCTGGATGGGACTCTCGTAAATACATGCTTGAATCAGAACTCGTGGAAGACATTGTCCAAGACGTTTTGCAAAAACTTCACTGTAAATATCCAAGCGAATCGAAGGGTCTTGTTGGAATTGACAAACACTATGCACATCTTGAATCATTCATGAGTATAGGGTCAAAAGAAGTTGGAATGATTGGAATGTGGGGGATGGGCGGCATCGGTAAGACAACCATTGCTGCAGCTATATTTGACCTTTTCTCTTCTCAATTTGAAGGATGTTGTTTCTTGGAAAATATAGGAGATGAATCAGAGAGGCATGGATTGAATTTTTTGCATAACAAACTTCTAACAATGCTACTGGAAGAAAAAGAAAATGTCCATGTTGGCACAGTCAGAATAGGTTTCAACTATAGTAAGAGCAGGCTTAGTCATAAAAAAGTTCTCATTGTGCTTGACGATGTAAGAACAATTGAGCAGCTAGATTTTCTAGTTGGAGCGCATACCTGCTTGGGACCGGGGAGTAGAGTCATTGTTACAGCTAGAGATAAGCACGCGCTTATTGAACGAGCTCATGAAATATATGAGGTGAAGCCATTAAACTTTCATGAATCTCTTCAGCTTTTCAGTTTAAGTGCTTTCAAGAAAGTGTGCCCAGATATTGGCTATCAGCAGCTATCGGAAAGTGTGGTTAATTATGCAGGTGGCATTCCATTGGCTTTGAAAGTTTTAGGCTCATTATTTTCTTATAAGAGTAAAGAAATATGGCAAAGTACAATGACTAAACTAAAGAAAATTCCATGTAGGGAAATTCAGAATATCTTAAGACTGAGCTATGATGGATTAGATGATACAGAGAAAGAAATATTTCTAGACATTGCTTGCTTTCTGAATGGAAAGGATAGACAGCATGTGACAAGACTTCTAGATGCTTGTGGTTTCTATGCAGTTCCTGGTTTAGAAACCCTTTTGGAAAAAGCTCTAATTACTTTTTCAAATAATAATCAAGTACAAATGCATGCCTTGATACAAGAAATGGGCCGAGAAATTGTTCGACAAGAATCTACTAAAGACCCTGGTAGACGCAGTCGATTGTACGATCACGAAGAAGTATATGATGTGCTGAAGAATAACATGGGAACCAGTGCAATTGAAGGCATTAGCTTAGATGTGTCCCAAATCAAAGATATGAATTTGAGCTCTGACATTTTTGTGAAGATGATCAACCTAAGATTTCTCAAATTCTACTCTCGGTCAGGTGAGAGATGTAGTGTCTCCCTTCCTGCTGGTCTTAAATCATTTTCTAATAAGTTAAGGTACCTCCATTGGAGTGCATATCCTTTGAAGTCTCTACCATCATCGTTTTCTCCTGAGAAACTTGTTGAGCTTTACATGCCAAACAGCCGCGTTAAAAGATTATGGGAAGGAGTGCAGGATCTTACTAATTTAAAGAAAATGGACCTCAGCTGTTGTGAGAACTTGATAGAGCTTCCAGATTTCTCCATGGCATCAAATCTCCAAACCGTTAACCTCTCTAGATGTGTAAGGCTGCGTCATGTTCACGCATCTATTTTATCGCTCCAAAAACTTGTCAATTTAAACCTGGTTTGGTGTAAAAATCTTAAGAGTCTTCTAAGCAATACCCCTTTAAATTCTCTGAGAATTCTTGAGCTCTACGGCTGCTCAAGTCTCAAGGAATTTTCGGTGACATCTGAAGAAATGACATACTTGGATTTAAGATGTACTGCTATCAATGAATTACCTCCATCAGTTAAGTACCTAGGTCGTCTTATGAACTTGGAGCTCAGTAGCTGTGTGCGCCTTAGAAATCTTCCAAATGAGTTCTCATGCCTGAAATCTCTTGGCCGTCTGGTACTTTCTGATTGCACGCTACTTGACACATCGAATCTGCATCTTCTATTTGATGGCCTGCGTTCTTTAGGATACCTTTGTCTCGACAACTGTTGTAACCTAACTGAACTCCCTCATAATATTAGTCTGTTATCATCATTGTATTATTTATCACTCAGTGGAAGCAATGTGAAGAACATTCCTAAAAGCATCAAGCATCTTTCACAGCTAGAATCTCTCGACTTGTGCAAATGCATGAGCATTCAGTATCTACCAGAACTTCCACCATCCATTGAAGTGTTGGATGTCACCAACTGCACGTCCTTGGAGACCGTCTTCACCTGTCCTGCTATTGATGAACTACTACAAGAGCACAAGGTATTCATTTCCTTCAAAAATTGTGTGGAATTGAATGAATACTCCCGAAATGGTATTATGTTAGATGCCCAAGTCAGACTAAAAGAGGCGGCCTATGTTGATGTATCAGCAAAAATAGAAGGGAGTGAGAGTGACCCTTGTTTCTTTTTTAAATCAGAGGCGACGTCGTCTTATCATCATCCACCAACTGTTATTTGCCCTGGAAGTAGAGTTCCTGATTGGTTTCACTATCGGTCAACTGAAGCATCGATAACCATCGAACTTTCAGTCTCACATTCTCCACAATCCAACATATTTGGTTTCATTTTCTGCCTCATTCTTCCTCAATCATTACCAAATGAAAAGAATCTCAATTGGAAAATCGGATGTGAATGCTACATGGAAGGTGGTGAAAACATCAGAAACACAAGTATGTGCTCTTTTGCTACTGGATTGGTTTCAGATCATGTGTACCTATGGTATGATGAAAACTTTTGTTTTGACATGTTTAACACAACTGGAAAAAGTAGAACCAATGACGACTATAGTGCTTATAAACCAAAGCTTTCATTTCAATTCTTTGTTGAAACCGAGGATAAGATGAATGTGGTGATTAAAGAGTGTGGGATCTGCCAAATCTATGGTTCAGAATATCTTAGTTTTGTTGAACAATTGGGGTTTGAGTTGGAGTTGGGAAATCAAGCAAAAAGATGTAGGGATATTTATGAGTTAGAATCAAGTGAAACAGGAACTCAAGTTGAAGGCTGTTTTGAGAATGAAGATGAACAAAAAGATACATTGCATCAAACAAAGAAACAGAAGCAAGAAGGGTGA 3489 0.3887 MKEVEKEGSFCSQSKKNDVFISFRGEDTRSNFTSHLHAALCRTKVKTYIDYNLKKGDYISETLVKAIQDSYVSIVVFSENYASSTWCLDELTHMMKCLKNNQIVVVPVFYNVDPSHVRKQSGSYMVAFEKHVCNLNHFNKVNDWREALAQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKGLVGIDKHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDESERHGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFLVGAHTCLGPGSRVIVTARDKHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDIGYQQLSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSSDIFVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVELYMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHVHASILSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLCLDNCCNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNCVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPGSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLILPQSLPNEKNLNWKIGCECYMEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDMFNTTGKSRTNDDYSAYKPKLSFQFFVETEDKMNVVIKECGICQIYGSEYLSFVEQLGFELELGNQAKRCRDIYELESSETGTQVEGCFENEDEQKDTLHQTKKQKQEG* 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1189 1162 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Mtr4g1189 1162 Gene3D - 14 176 IPR035897 -
Mtr4g1189 1162 Gene3D - 177 343 IPR027417 -
Mtr4g1189 1162 MobiDBLite consensus disorder prediction 1134 1162 - -
Mtr4g1189 1162 Pfam NB-ARC domain 209 427 IPR002182 GO:0043531
Mtr4g1189 1162 Pfam Leucine Rich Repeat 608 627 IPR011713 -
Mtr4g1189 1162 Gene3D Ribonuclease Inhibitor 722 906 IPR032675 -
Mtr4g1189 1162 Gene3D Ribonuclease Inhibitor 480 721 IPR032675 -
Mtr4g1189 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Mtr4g1189 1162 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Mtr4g1189 1162 PRINTS Disease resistance protein signature 214 229 - -
Mtr4g1189 1162 PRINTS Disease resistance protein signature 291 305 - -
Mtr4g1189 1162 PRINTS Disease resistance protein signature 383 397 - -
Mtr4g1189 1162 PRINTS Disease resistance protein signature 627 643 - -
Mtr4g1189 1162 SMART till_3 16 154 IPR000157 GO:0007165
Mtr4g1189 1162 SUPERFAMILY L domain-like 488 879 - -
Mtr4g1189 1162 Pfam C-JID domain 958 1102 IPR045344 -
Mtr4g1189 1162 Pfam TIR domain 18 192 IPR000157 GO:0007165
Mtr4g1189 1162 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1133 - -
Mtr4g1189 1162 Gene3D - 349 432 IPR042197 -
Mtr4g1189 1162 MobiDBLite consensus disorder prediction 1142 1162 - -
Mtr4g1189 1162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1133 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1189 Mtr-Chr4 16682225 16687714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1189 12 846 WRKY Transcription Factor Family AT4G12020 35.522 2.36e-132 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1189 - - mtr:MTR_4g043630 2323.89