Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1160 ATGGGTTACCTCAATTTTTCTTGCAAAGCTGAATCTTCAATCTCAACTTCAAATTCTGTAACATCATCATCAAAACCGAACAAAGAGAACAAAGAAAAAACCATCAAGATCCAACAGTTTCAATACAGTGACCTTGAAGCTGCAACAAACAATTTCTCAGACAACAAACTTCTTGGCAAAGGAAGTCATGGTTATGTCTACAAAGCAATTGTTCGTGGTAAACCTGTAGCAGTAAAAAGACCATCAAGACCCATTTCATCTTCTGAAATCACCAATGAAGTTGATAATGAAATCGATATTTTGTCGAAAATTCATAGTCCCAGGTTGGTTAATCTTGTTGGTTTCACCAATGATTCTAAAGATAGGCTTTTGGTTGTTGAGTTTATGTGTAATGGTACACTTTTTGATGTTCTTCATTCTTCTTCAAGAAATCTTAACTGGGGTAGAAGAATTCGTTTGGCTTTGCAAACTGCTAAGGCTATTGATATTCTTCATTCATCAAACCCACCTGTTATTCATAGAGATATTAAATCTGCTAATGTTCTTATTGATCAGAATTATAATGCTAGATTAGGTGATTTTGGTTTAGCACTTAGAGGTTTTGATAGGGTGAGGTCAACTCCACCTGCTGGTACTATGGGCTATCTTGATCCTTGTTATGTTACACCTGATAATTTGAGTACTAAGATTGATGTTTTTAGTTTTGGGATTTTGTTGTTGGAGATTATTAGTGGAAGAAAAGCTATTGATGTTGCTTATTCACCTCCTTCTGTTGTGGATTGGGCTATTCCACTTATTAAGAAAGGGAAAGTTTTTGCTGTTTATGATCCTAGAATACCACCTCCTAAGGATCTTGTTGTGAGGAAACAATTGGCTTTGATTGCGGCGAAATGTGTTAGGTCTTGTAGGGAGAGAAGGCCGTCGATGAATGAGGTTGTTAATTGGCTTAGTGGGTTGTGTAAATTGGTTCCGAATCATTCGTGGAATGGTTTTAATAACCCTTGTATGATGGTTGAAACCGTTGGACGTCCGGTTGAACCGAGGAACGGACATGTCAATAGTTCGAGGTTTGTGGAAGATGGGAATTTTGATGGTTTGGATGCTAGATTGTCGAAGTCTGCGTTGAGATATTCGAGGAGAGTGCATTCGGATTTGGGGTTCAGTAGTAACTTGATGGACCTTATGGCTACGACTGAGGAAGCGGAATTTGTAAGAGACGGTGTTGTTGAACATAGTTCTAAATCAGTTGAACAAGTTTCTAGTTCAAGATTTGGAAGTGGAAGATATTTTGCAAAAGGGAAGAATCTATACAGGCCTTGTGGTACTGATAAGGATGCTTTTGGTTTGAGTAAAGTTCAGATTGTTGGGGAGAGATCTTCAAAACAGCATGAGATTTCTGAATCAACTTTGAATTCTCTTGCAACTGAGGCTATCTAG 1437 0.3793 MGYLNFSCKAESSISTSNSVTSSSKPNKENKEKTIKIQQFQYSDLEAATNNFSDNKLLGKGSHGYVYKAIVRGKPVAVKRPSRPISSSEITNEVDNEIDILSKIHSPRLVNLVGFTNDSKDRLLVVEFMCNGTLFDVLHSSSRNLNWGRRIRLALQTAKAIDILHSSNPPVIHRDIKSANVLIDQNYNARLGDFGLALRGFDRVRSTPPAGTMGYLDPCYVTPDNLSTKIDVFSFGILLLEIISGRKAIDVAYSPPSVVDWAIPLIKKGKVFAVYDPRIPPPKDLVVRKQLALIAAKCVRSCRERRPSMNEVVNWLSGLCKLVPNHSWNGFNNPCMMVETVGRPVEPRNGHVNSSRFVEDGNFDGLDARLSKSALRYSRRVHSDLGFSSNLMDLMATTEEAEFVRDGVVEHSSKSVEQVSSSRFGSGRYFAKGKNLYRPCGTDKDAFGLSKVQIVGERSSKQHEISESTLNSLATEAI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1160 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Mtr4g1160 478 Gene3D Transferase(Phosphotransferase) domain 1 129 328 - -
Mtr4g1160 478 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 462 - -
Mtr4g1160 478 PANTHER OS01G0750732 PROTEIN 1 462 - -
Mtr4g1160 478 SUPERFAMILY Protein kinase-like (PK-like) 35 327 IPR011009 -
Mtr4g1160 478 ProSitePatterns Protein kinases ATP-binding region signature. 58 79 IPR017441 GO:0005524
Mtr4g1160 478 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1160 478 Gene3D Phosphorylase Kinase; domain 1 22 128 - -
Mtr4g1160 478 SMART serkin_6 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1160 478 Pfam Protein kinase domain 53 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1160 Mtr-Chr4 15903395 15905418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1160 25 327 Receptor kinase-like Gene Family AT3G59420 42.492 2.60e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr4g1160 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1160 - - gmx:100805692 703.745