Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1159 ATGATGCTCTCAACATACAACAAATGCATTGTTTCTTTTACGTTGTTGTGTTTCTGTTTAGGGTTCTCACAAGGTGGTATCAAACAAGGTGATATTGTAAGAGATCAAGAAGGTGATGTTTTATTCTCAGATGGTTTCAACTTTGCTATGGGTTTCTTTGGTTTCGGCAACTCTTCTTCTCGTTATGTCGGTATTTGGTACTATAACATACCTGGACCGCAGATTATTTGGGTTGCAAATAGAAACACACCCATAAATGGCAACCGTGGTTCTTTCACTGTAGCGGAAAATGGTAATTTGGTTATCCTTGATGAAAACAAAAACCAAATATGGTCGACAAATGTTTCTATCAGTCAAAACAATACGGATAACTATGAAGCTGTTCTTAGAGATGATGGTAATCTTGTTCTTGCGAATGAGAATGCGGTGTTATGGGAAAGCTTTGAGAATCCATGTGATACTTATGTACCTGGTATGAAAGTTCCTGTGAATGGGAAGAGTTTTTTCTTCACATCATGGAAATCAAGTACAGATCCTTCAATAGGGAACCATAAAATGGGAATTGATACTGTAGGGTTACCACCACAGGTATTTGTTTGGGAAGGTGAGAGAAAAAAATGGAGAAGTGGTTATTGGGATGGTAGGGTTTTTACCGGTGTTGATGCGAAAAGTAGTTTTCTTCATGGTTTTATACTAAATTATGATAGTAATGGAGATAGATATTTTGTTTATAATGATAATGAGTGGAAGTTGAATGGTAATAGTTCAGTTAGGTTTCAGATTGGTTGGGATGGTTATGAAAGAGAGCTTATATGGAATGAAACTGAGAAATATTGGAGTGTGAATCAAAAGGGGCCTCATAATCAGTGTGAATTTTATAACTATTGTGGCGATTTTGCATCTTGTGATACGTCAGATTCGGGTTGGGCTATTTGTAGTTGCTTACAAGGGTTTGAACTAAAGGATAAGGAGAATTTGTCAAGTGGATGTACGAGGAAGACAGCATTGAAGGGTGATCAGACAAGTGATGGATTTGACGAGGATGGTTTCTTTGAGCGTACGAGTATGAAGTTACCCGACTTTGCACGTGTGGTTGATACTAAGGATTGTGAAGGTAATTGTTTGGAGAATGCTTCTTGTACTGCTTATGCAGAAGTAACTGGAATTGGTTGTATGGTTTGGCATGGAGATTTGGTCGATGTTCAACACTTAGGACGCGATGAAGGAAATTCGTTATATATTCGTCTTGCTCAGTCTGATTTAGGTCATGGAGGGAAAATGAACAGGACTATGATTGTGATTATATCAACTGCTGTAACAGGGTTAATCTGCCTAGGAATCTTTGTATTGTTGTTACCTGTCGTTTATGCACGCGAGACGTCATCAGAATTTTCAGGATCACTTGAACTTAGTTTGAAAAGTAATCAACTAAGCGGAGCCGAGCTTCCATTTTTCAGTTTTACTTGCATGTCAGCAGCTACCAACAATTTTTCTCAAGCAAATAAGCTTGGACAAGGCGGATTCGGTCCTGTGTACAAGGGAAAGCTTCCAACCGGAGAAGAAATTGCTGTCAAGAGGCTTTCTAGACCGTTCGGACAAGGTTTAGACGAGTTCAAGAATGAAATGAGGCTGTTTGCGAAGCTTCAACATAGAAATCTGGTTAGACTAATGGGATGTTCTATTGAAGGAGATGAAAAGTTGCTTGTATACGAATTCATGCCGAACAAAAGCTTGGATTACTTTTTATTTGATCCTATCAAGAAAGCACAATTAAACTGGGCAAGACGTTATGAAATCATTGAAGGCATTGCAAGAGGACTACTTTATCTGCATCGCGATTCAAGACTCAGAATAATTCATCGAGATCTAAAACCAAGTAACATTTTGTTAGATGAAAACATGAATCCAAAAATATCTGACTTTGGCTTGGCCCGGATATTTGGTGGAAACCAGAATGAATCCAATACAACCAGAGTCGTTGGTACATATGGTTATATGTCTCCTGAATATGCCATGCAAGGCGTATTATCAGCTAAAGCAGACGTATATAGTTTTGGCGTATTGCTACTGGAGATTGTGAGTGGTCACAAAAACACCAGCTTTCGTCATTCAGATGATTCAAGTCTCATAGGATATGCATGGCATCTATGGAATACAAAGAGATCAAAGGAACTTGTCGATGCTTGCATTAGTGATTTGACTCCCAATAACGATGTTATTAATCGATGCATACAAATAGGGATGTTATGTGTGCAAGATTTAGCATCTCGACGACCAAAGATGTCCGAAATTGTGTTGATGCTTGAGAGTAAATCAATTACTCTTCCCTTACCTATGCAGCCTTTGATTACTTCCATCAAAAGAAACGTTAACAGAGAGTCTCCCAAGAATGCTGTTGATGACTCAAATGATCTCACAATCACAATGGTAGAAGGGAGATAG 2442 0.3857 MMLSTYNKCIVSFTLLCFCLGFSQGGIKQGDIVRDQEGDVLFSDGFNFAMGFFGFGNSSSRYVGIWYYNIPGPQIIWVANRNTPINGNRGSFTVAENGNLVILDENKNQIWSTNVSISQNNTDNYEAVLRDDGNLVLANENAVLWESFENPCDTYVPGMKVPVNGKSFFFTSWKSSTDPSIGNHKMGIDTVGLPPQVFVWEGERKKWRSGYWDGRVFTGVDAKSSFLHGFILNYDSNGDRYFVYNDNEWKLNGNSSVRFQIGWDGYERELIWNETEKYWSVNQKGPHNQCEFYNYCGDFASCDTSDSGWAICSCLQGFELKDKENLSSGCTRKTALKGDQTSDGFDEDGFFERTSMKLPDFARVVDTKDCEGNCLENASCTAYAEVTGIGCMVWHGDLVDVQHLGRDEGNSLYIRLAQSDLGHGGKMNRTMIVIISTAVTGLICLGIFVLLLPVVYARETSSEFSGSLELSLKSNQLSGAELPFFSFTCMSAATNNFSQANKLGQGGFGPVYKGKLPTGEEIAVKRLSRPFGQGLDEFKNEMRLFAKLQHRNLVRLMGCSIEGDEKLLVYEFMPNKSLDYFLFDPIKKAQLNWARRYEIIEGIARGLLYLHRDSRLRIIHRDLKPSNILLDENMNPKISDFGLARIFGGNQNESNTTRVVGTYGYMSPEYAMQGVLSAKADVYSFGVLLLEIVSGHKNTSFRHSDDSSLIGYAWHLWNTKRSKELVDACISDLTPNNDVINRCIQIGMLCVQDLASRRPKMSEIVLMLESKSITLPLPMQPLITSIKRNVNRESPKNAVDDSNDLTITMVEGR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1159 813 CDD B_lectin 38 151 IPR001480 -
Mtr4g1159 813 Pfam S-locus glycoprotein domain 207 321 IPR000858 GO:0048544
Mtr4g1159 813 Pfam Protein kinase domain 498 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1159 813 CDD STKc_IRAK 503 769 - -
Mtr4g1159 813 Gene3D Phosphorylase Kinase; domain 1 461 572 - -
Mtr4g1159 813 SMART blect_4 30 151 IPR001480 -
Mtr4g1159 813 Pfam D-mannose binding lectin 75 174 IPR001480 -
Mtr4g1159 813 Pfam PAN-like domain 347 401 IPR003609 -
Mtr4g1159 813 CDD PAN_AP_plant 344 417 - -
Mtr4g1159 813 SMART serkin_6 497 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1159 813 SMART ntp_6 346 416 IPR003609 -
Mtr4g1159 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mtr4g1159 813 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Mtr4g1159 813 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Mtr4g1159 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 179 IPR036426 -
Mtr4g1159 813 ProSiteProfiles PAN/Apple domain profile. 330 417 IPR003609 -
Mtr4g1159 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Mtr4g1159 813 ProSiteProfiles Protein kinase domain profile. 497 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1159 813 Gene3D - 27 148 IPR036426 -
Mtr4g1159 813 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 459 813 - -
Mtr4g1159 813 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 452 - -
Mtr4g1159 813 SUPERFAMILY Protein kinase-like (PK-like) 483 789 IPR011009 -
Mtr4g1159 813 ProSiteProfiles EGF-like domain profile. 286 324 IPR000742 -
Mtr4g1159 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 452 - -
Mtr4g1159 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 459 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1159 Mtr-Chr4 15823926 15827295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1159 425 813 Receptor kinase-like Gene Family AT4G05200 50.864 3.40e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g1159 Pkinase 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1159 - - aprc:113869342 1051.2