Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1125 ATGTGTGTGAAATTTGACAGATTCTACACTGAATGCCTTGGCATGAAGCTGTTAAGAAAACGTGATATACCAGAAGACAAATACTCAAATGCTTTTCTTGGATACGGGCCTGAAGATTCCAGTTTTACGGTTGAACTTACTTATAATTATGGAATGGATAACTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTATAGCTGAAGATGTTTCCAAGACAGTAGATATTGTAAAGGCGAAAGGGGGAAAGGTTACAAGAGAACCAGGGTCTGTCATAGGTGGCTCTATAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTAAGCTTTTGGAGAGAAGAACTACTCGTGAACCCTTATGCAAAGTGATGCTTCGAGTAGGTGACCTTGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCCACAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCAAGTTGGGATATGGTCCTGTTCTAGAACTGACGTATAACTACGGCGTCACTAATTATGACAAAGGAAATGGCTATGCACAGATTGCTATAGGCACGGATGATGTCTATAAGACTGCAGAAGCAATCAAATCATGTGGAGGGAAGGTTATCCGCGAACCTGGACCCTTACCTGGTATCAACACCAAGATCGTTGTTTGCTTGGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAACTAGAGTGA 747 0.4096 MCVKFDRFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGMDNYDIGTGFGHFGIIAEDVSKTVDIVKAKGGKVTREPGSVIGGSIVTASVEDPSGYRFKLLERRTTREPLCKVMLRVGDLDRVIAFYEKAVGMKLLHKIDNPEEKYTVAKLGYGPVLELTYNYGVTNYDKGNGYAQIAIGTDDVYKTAEAIKSCGGKVIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1125 248 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 125 236 IPR004360 -
Mtr4g1125 248 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 111 IPR004360 -
Mtr4g1125 248 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 121 240 IPR037523 -
Mtr4g1125 248 PANTHER LACTOYLGLUTATHIONE LYASE 7 248 - -
Mtr4g1125 248 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 115 IPR037523 -
Mtr4g1125 248 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 116 IPR029068 -
Mtr4g1125 248 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 7 248 - -
Mtr4g1125 248 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 123 240 IPR029068 -
Mtr4g1125 248 TIGRFAM glyox_I: lactoylglutathione lyase 7 123 IPR004361 GO:0004462|GO:0046872
Mtr4g1125 248 TIGRFAM glyox_I: lactoylglutathione lyase 122 241 IPR004361 GO:0004462|GO:0046872
Mtr4g1125 248 Gene3D - 6 117 IPR029068 -
Mtr4g1125 248 Gene3D - 118 248 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1125 Mtr-Chr4 15025900 15032998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1125 122 239 Calmodulin-binding Proteins AT1G08110 26.351 6.19e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1125 K01759 - mtr:MTR_3g110185 479.174