Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1117 ATGGAGGAAGTTCAAGAGTCTCAACCACAATCAAAACCAGGTCAAGAAAATAATGTAGATGAAGTGATTGATGAAAATTCTGAATATGAAAAAGGGGAAACACCAGAAGAATTATTGAGTAGTCCTCCAAAAGTTGATTCTGAAGTTGAAGTTCTTCATGAGAAGGTTACAAAACAAATTATTAAGGAAGGTCATGGTCAGAAACCTTCCAAGTATTCAACATGCTTCTTCCATTACAGGGCATGGTCTGAGAACACGGAGCACAAATTTGAAGATACATGGCAGGAGCAACGACCAACTGAGATGGTAATAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGGCATTGGGGTGGCAAGCATGAAAGCGGGGGAGCGAGCATTGTTGCGTGTAAGCTGGGAATTAGGATATGGACAGGAAGGAAGCTTTTCATTTCCAAATGTTCCACCAATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGATGAAACAAAAGATGGAAAAGCTCGCAGTGATATGACTGTAGAGGAACGGATTGGGGCAGCGGATCGGAGAAAGATGGATGGAAATGTTCTGTTTCAGGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCTTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACACGGCGGCCTGTCTGATTAAGCTGAACCGCTATGAAGAAGCTATAGGACAATGCAGCATTGTATTAAGTGAGGACGAGAGCAATTTGAAGGCTTTATTTAGGAGAGGTAAGGCTAGAGCAGCACTCGGGCAGACAGATGCTGCCAGGGAAGATTTTCTAAAAGCGCGCAAGCATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAAGCTACTTGCTGAACATGATAAAGCTATTTATCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGACCTCAACCAGTACCGCAGAAAAGGAATTGGTTCATAGTTGTTTGGCAGTGGTTGGTTTCAGTGTTTCATAACTTTATCACACTTTTCAACCGTGAAAAAAAGCACAAAGACGACTAA 1119 0.4147 MEEVQESQPQSKPGQENNVDEVIDENSEYEKGETPEELLSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGQEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIFGPRPQPVPQKRNWFIVVWQWLVSVFHNFITLFNREKKHKDD* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1117 372 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 32 332 - -
Mtr4g1117 372 MobiDBLite consensus disorder prediction 1 46 - -
Mtr4g1117 372 SMART tpr_5 184 217 IPR019734 GO:0005515
Mtr4g1117 372 SMART tpr_5 235 268 IPR019734 GO:0005515
Mtr4g1117 372 SMART tpr_5 269 302 IPR019734 GO:0005515
Mtr4g1117 372 ProSiteProfiles TPR repeat profile. 269 302 IPR019734 GO:0005515
Mtr4g1117 372 SUPERFAMILY FKBP-like 34 163 - -
Mtr4g1117 372 Gene3D Tetratricopeptide repeat domain 166 297 IPR011990 GO:0005515
Mtr4g1117 372 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 68 161 IPR001179 GO:0003755
Mtr4g1117 372 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 72 164 IPR001179 GO:0003755
Mtr4g1117 372 Gene3D - 40 165 IPR046357 GO:0003755
Mtr4g1117 372 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 32 332 - -
Mtr4g1117 372 SUPERFAMILY TPR-like 176 328 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1117 49 337 Calmodulin-binding Proteins AT5G48570 33.108 1.93e-31 123