Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1112 ATGGCATTTCACGTTGCTTGTCCAATTACATGTCGAAGAATCTGTTTCTGTTCGTTAGGGTTTCCGCGTTCTCTGAACGGAACGAAGAACGCAACGAAGGATTTTCTCGATGAGGTAAATTTGCTGAGTGATTTTCTCGGTGATTCACGGAAGGAAGATGGTGGAACGATTCAAGTTGCGGTGCCGAAAGTGGTGCCACCGCCGCCGCAGGAAATTGTTGCTGTTAGCGGTGGTGGTGGTGGTGGTGGTGATGTGGTTGATGAATCTGCATCCATGAAAGCTAAGCGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAGGCTTGAATCTGGCGATGTTGTGGATACATCGGGCAATCTTAATGGAGAAGAACAGGGGCAATCCAATGTAAAGGTCTTTTGTCGAATGTGCAATCGTGTCGAGAACGAAGGAAGTGAGAAAGCGAAAAAGATGCTGTCCTGTAAAAGTTGTAGTAAGAAGTACCATAGGAGCTGCTTGAAAAGTTGGTCTAATAATAGAGATTTATTTCATTGGAGTTCGTGGACCTGCCGTGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCCAGTAAGTTCATGTTCTGTAAAAGATGTGATGGTGCTTACCATTGTTACTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCGAAACACACAAAGTGTCACAGTTGCGCATCCAATGTCCCTGGGAATGGACTAAGTGTGAGGTGGTTTCTGGGATACACGTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAATTACTGTCCTGTTTGTCTGAAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTGCATTGCCAGTGTGATGATATTAGTGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATACATGTCCTACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAATGTTGCTGATAAAGATTTAATTACCAGCTTGAGGGCTTCAGCTGGTTTACCAACACAAGAAGAAATATTTTCCATTTCACCATATTCTGACGATGAGGATAGTGGGCCTTTGAAGTTAAAGAGTGATTCTGGTTTTAAGTTCTCTTTTAAGAATTTTCCCAATAATTCACCTACCAAGATGAATGATTATGGAAAGAAATCTTCGAACAAAAAGTCTGCTAAGAAAAAGGACTCTCTGTCATTCATGACGGGTAAAATTGATGCACGCCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACATAGCTTGGATGATATGCAATCCCAGAGAAATGAAGGTCCTGATATTTATTCATCACCTGCTACTGGAAGCTTGACTCAAACTGAAGTATCTTGTCCTATCAATCAGACAGGGATTTTGAAACGTAAGTCTGTTGATGAGGTGATGGTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGGAATAAGGCAAATATTTTGGATAGTGAAGAGAGTGGAAAACATGGTGATAAGTCTCAGAATGTGAAAAAGAATAAGTTGGTTATAAATTTGGGAGCACGGAAAATTAATGTAGCTAGTTCTCCGCTGTCTGATAATGCAAGCTTCCAAAGAGATCAAGATCTGGTTACTGCCAATGGAAATGAAAATCCAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGGAGCAGCTGGACATATTGATGGTAAAGGAAGTAGGGTTGATTCAGGCCAATCAAAACATTTAAAGGTTTACGGAAGAGAAGGAAACACAATCAAGTTCGGAAAAGTAAAGCCAAGTGTTTCTGAATTCAACTTCACCTCTGGTAGAGGCAATATGTCGGATGGGGGTGAAGTTGGTCCTTTAGAGGGATCTCACATCATGCGGGGAAAACGTAGTACTCATGGAATGATCAACCAAGTTGGATTAGGTGCAACGTCAAGAGGTGAAAGGACATATTTGGCGAAGCAGTCAGAAGGTAGCTCTGATGTATATGATGAGACACATGACCATAATCACATGCCTTCACATTCTTTGCCAAAAGATTCTAAACCTTTACTGAAATTTAAAATAAAAAAGCCTATCGAAAGTCAAAATTCTCATCAGGAAGAGGAGAAGACCACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTTAAAGAAAGATCATTGTTTAATGACTCTGAAGGTAAAGAAAGATCATTGGTTAATGACTCTGAAGGTGCAAGTCAATCTCCTGGAGAGAATATAAATCATGAGAACATGGATGCAAACTGGATTTTGATGAAATTGGGAAGTGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGATATCCGATGATTCTTGGCACAAGGGAGAGGTGACTGGTGTAGTTGAAGGCACCTCAAATCTACATGTTACTTACGAGGATGGAAAAGTGAGTATCTTGGAACTCAGGAAGCAGGGAGTTCGTTTTGTTCCTCAAAAGCAAAAGAGATCGAAAACATGA 2613 0.4152 MAFHVACPITCRRICFCSLGFPRSLNGTKNATKDFLDEVNLLSDFLGDSRKEDGGTIQVAVPKVVPPPPQEIVAVSGGGGGGGDVVDESASMKAKRDALQRKGAAAMIAAEEYARRLESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSEKAKKMLSCKSCSKKYHRSCLKSWSNNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTKCHSCASNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDHCQRWVHCQCDDISDERYHQFQVDGNLQYTCPTCRGECYQVKNLEDAVQELWRRKNVADKDLITSLRASAGLPTQEEIFSISPYSDDEDSGPLKLKSDSGFKFSFKNFPNNSPTKMNDYGKKSSNKKSAKKKDSLSFMTGKIDARHSFEGHSDIRSLHSLDDMQSQRNEGPDIYSSPATGSLTQTEVSCPINQTGILKRKSVDEVMVSDEERKPRVVRIKRNKANILDSEESGKHGDKSQNVKKNKLVINLGARKINVASSPLSDNASFQRDQDLVTANGNENPAHLTKGNKFALDRHDGAAGHIDGKGSRVDSGQSKHLKVYGREGNTIKFGKVKPSVSEFNFTSGRGNMSDGGEVGPLEGSHIMRGKRSTHGMINQVGLGATSRGERTYLAKQSEGSSDVYDETHDHNHMPSHSLPKDSKPLLKFKIKKPIESQNSHQEEEKTTIKGQRSKRKRPSPFKERSLFNDSEGKERSLVNDSEGASQSPGENINHENMDANWILMKLGSDAIGKRVEVHQISDDSWHKGEVTGVVEGTSNLHVTYEDGKVSILELRKQGVRFVPQKQKRSKT* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1112 870 MobiDBLite consensus disorder prediction 759 777 - -
Mtr4g1112 870 SUPERFAMILY FYVE/PHD zinc finger 278 336 IPR011011 -
Mtr4g1112 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 337 IPR013083 -
Mtr4g1112 870 MobiDBLite consensus disorder prediction 681 792 - -
Mtr4g1112 870 SUPERFAMILY FYVE/PHD zinc finger 187 248 IPR011011 -
Mtr4g1112 870 ProSiteProfiles Zinc finger PHD-type profile. 278 337 IPR019787 -
Mtr4g1112 870 SMART PHD_3 197 243 IPR001965 -
Mtr4g1112 870 SMART PHD_3 142 196 IPR001965 -
Mtr4g1112 870 SMART PHD_3 280 335 IPR001965 -
Mtr4g1112 870 Pfam PHD-finger 280 335 IPR019787 -
Mtr4g1112 870 ProSitePatterns Zinc finger PHD-type signature. 143 195 IPR019786 -
Mtr4g1112 870 PANTHER PHD FINGER FAMILY PROTEIN 2 864 - -
Mtr4g1112 870 MobiDBLite consensus disorder prediction 420 436 - -
Mtr4g1112 870 PANTHER HISTONE ACETYLTRANSFERASE 2 864 - -
Mtr4g1112 870 SUPERFAMILY FYVE/PHD zinc finger 132 197 IPR011011 -
Mtr4g1112 870 MobiDBLite consensus disorder prediction 700 749 - -
Mtr4g1112 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 252 IPR013083 -
Mtr4g1112 870 MobiDBLite consensus disorder prediction 406 436 - -
Mtr4g1112 870 ProSiteProfiles Zinc finger RING-type profile. 281 335 IPR001841 -
Mtr4g1112 870 ProSiteProfiles Zinc finger PHD-type profile. 140 198 IPR019787 -
Mtr4g1112 870 MobiDBLite consensus disorder prediction 778 792 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr4g1112 PHD 6.7e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1112 - - mtr:MTR_4g037745 1736.85