Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1111 ATGTCCAACCTTAACCATAATCATATGCATACATTTCCAATTCAAGCTACTGTATTGGTTTCTTTGTTGCTAGCTCTATGCCAAATCACTTCAGGGCTGACACAATTTGAAGCCTTGTTAAAGTGGAAACAAAGTCTCCCTCAACAACCAATTCTTGATTCATGGATCATTAACAACTCTAGTTCAACACAAACACCATGTTTATGGAGAGGTATCACTTGTGATGATTCTAAAGGAAGTGTTACAATCATAAACTTGGCATTTACTGGACTTGAAGGTACTCTTAATCACTTAAACTTGTCAGTTTTTCCAAACCTTCTTCGTCTTGATCTCAAAGCAAACAATCTCACCGGTGTCATACCTGAAAACATCGGTGTTCTTTCAAAACTCCAATTTCTTGATCTTTCTACAAATTATCTCAATGGAACTTTGCCTCTTTCTATTGCTAATATGACTCAAGTTTATGAGCTTGATGTTTCACGAAACGACGTATCTGGTATACTAGACCATCGTTTGTTTCCTGATGGCACTGATAAACTCAGTTCTGGGCTTATCAGCATCAGGAATCTACTTTTCCAAGATAACTTTTTGGGCGGTCGATTACCGAACGAATTAGGGAACATAAAAAACTTGACTGTACTAGCACTTGATGGAAACAATTTCTTTGGTCCTATTCCTTCATCTTTAGGAAACTGTAAACATTTAAGCATTCTAAGATTGAATGAAAACCAATTATCTGGCTCAATACCACCAAGTATTGGCAAATTGACCAACCTAACTGATGTAAGGTTTTTCACCAATAACCTAAATGGCACTGTGCCACAAGAATTTGGAAACCTTTCATCTTTGGTTGTTTTACATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCTCAAGTTTGCAAAAGTGGCAAACTTTTGAATTTCAGTGCATCCTTTAACAGTTTCACTGGTCCAATTCCAATAAGTCTTAGAAACTGCCCTTCTTTGTATAGAGTTAGACTTGAATACAACCAGTTAACCGGTTACGCAGATCAAGATTTTGGAGTTTATCCAAATCTTACTTACATGGATTTCAGCTATAATGCGGTCCAAGGTGTTTTATCTTCTAAATGGGGATCCTGTAAAAACTTGCAATTCCTGAATTTGGCTGGTAATTCGGTGAATGGAAAAATTCCTAGTGAGATTTTTCAATTGGAACAATTACAAGAGCTTGATCTATCCTATAACCAATTATCAGGAACTATTCCTTCACAAATTGGAAATGCTTCAAATTTGTATCATTTAAATTTGGGTGGAAATAGGCTTTCTGGTAAGGTACCAATTGAAATTGGAAAGCTTTCAAATTTGCAATATTTAGACCTTTCAATGAATGCATTTTTAGGAGAAATTCCAATTCAGATAGGTGATTGTTCCAATTTGCTGAATTTAAATTTGAGTAACAATCACTTGAATGGCACAATTCCTTTCCAAATTGGAAACCTTGGATCATTACAAGACTTTTTGGATTTGAGTTACAATTCAATTTCAGGGGAAATTCCTTCTAATATTGATAAGCTTTCAAATTTGATAAGCTTGAATATCTCAAACAACAATTTGTCAGGTAAAATACCTAATGAAATTAGTGAAATGTTGAGTTTGTCAAGTCTTAACCTCTCTTACAATCATTTGGAGGGGAATGTTCCTAAGAGTGGCATTTTCAAATTAAACTCTTCTCATGCACTTGACTTGAGCAACAACCAAGGTCTATGTGGTAGTTTCAAAGGTTTGACACCTTGTAATGTTTCATCAAGACACAAAAAAAAGGTTGTGATTCCAATTGTTGCCTCTTTAGGAGGTGCACTTTTTCTTTCATTGGTATTTGTTGGCATATTTTTGTTATGCTACAAGAAAAAATCAAGATCTTTAAAAAAGTCTTCAATTAAGATACAAGATCCATTTTCAATTTGGTACTTCAATGGAAGAGTTGTATATAATGACATAATTGAAGCTACCAACAGTTTTGACAATAAGTATTGCATTGGCGAAGGTGCATTTGGAAATGTTTACAAAGCCGAACTGAAAGGAGGTCAAATATTCGCGGTGAAAAAGCTAAAATGTGATAAAGAAAACTTAGACACTGAGAGTATAAAAACATTTGAAAGTGAGGTTGAAGCTATGACAGAAACAAGGCACAGAAACATTGCGAAGCTATATGGATTTTGTTGTAAAGGGATGCACACATTTCTTGTTTATGAGTACATGGATAGAGGGAGTTTAGAGGATATGTTGGTTGATGATGAGAGAGCTTTGGAACTTGATTGGTCTAAACGGTTTGATATTGTTAAAGGCGTTGCGAGTGCTCTCTCATATATGCATCATGATTGTTCTCCAGCTTTGATTCATAGAGATATATCAAGCAAGAATGTTTTGTTATCGAAAAATCTTGAAGCTCATGTCTCAGATTTTGGTACCGCAAGATTTCTTAAGCCAAATTCGCCTATTTGGACTTCATTTGCCGGCACATATGGTTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAAAAATGTGATGTATTCAGCTTTGGTGTTTTAGCATTTGAGATTCTAACAGGAAAGCACCCTGGTGATCTTGTTTCTTACAGACAAACATCAAATGATCAAAAGATTGACTTCAAAAAAATTTTAGACCCTCGTTTACCTTCTCCTCCAAGGAACATTTTGAAGGAATTGGAATTGGTTGCAAATTTAGCTCTTTCTTGTTTACATACACATCCTCAATCTAGACCTACTATGAGAAGTGTAGCCCAATCTCTAGAAAGGGAGACCAAATAA 2826 0.3556 MSNLNHNHMHTFPIQATVLVSLLLALCQITSGLTQFEALLKWKQSLPQQPILDSWIINNSSSTQTPCLWRGITCDDSKGSVTIINLAFTGLEGTLNHLNLSVFPNLLRLDLKANNLTGVIPENIGVLSKLQFLDLSTNYLNGTLPLSIANMTQVYELDVSRNDVSGILDHRLFPDGTDKLSSGLISIRNLLFQDNFLGGRLPNELGNIKNLTVLALDGNNFFGPIPSSLGNCKHLSILRLNENQLSGSIPPSIGKLTNLTDVRFFTNNLNGTVPQEFGNLSSLVVLHLAENNFIGELPPQVCKSGKLLNFSASFNSFTGPIPISLRNCPSLYRVRLEYNQLTGYADQDFGVYPNLTYMDFSYNAVQGVLSSKWGSCKNLQFLNLAGNSVNGKIPSEIFQLEQLQELDLSYNQLSGTIPSQIGNASNLYHLNLGGNRLSGKVPIEIGKLSNLQYLDLSMNAFLGEIPIQIGDCSNLLNLNLSNNHLNGTIPFQIGNLGSLQDFLDLSYNSISGEIPSNIDKLSNLISLNISNNNLSGKIPNEISEMLSLSSLNLSYNHLEGNVPKSGIFKLNSSHALDLSNNQGLCGSFKGLTPCNVSSRHKKKVVIPIVASLGGALFLSLVFVGIFLLCYKKKSRSLKKSSIKIQDPFSIWYFNGRVVYNDIIEATNSFDNKYCIGEGAFGNVYKAELKGGQIFAVKKLKCDKENLDTESIKTFESEVEAMTETRHRNIAKLYGFCCKGMHTFLVYEYMDRGSLEDMLVDDERALELDWSKRFDIVKGVASALSYMHHDCSPALIHRDISSKNVLLSKNLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYRQTSNDQKIDFKKILDPRLPSPPRNILKELELVANLALSCLHTHPQSRPTMRSVAQSLERETK* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1111 941 SUPERFAMILY RNI-like 74 298 - -
Mtr4g1111 941 SMART serkin_6 669 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1111 941 Gene3D Transferase(Phosphotransferase) domain 1 749 941 - -
Mtr4g1111 941 SMART LRR_typ_2 400 424 IPR003591 -
Mtr4g1111 941 SMART LRR_typ_2 448 472 IPR003591 -
Mtr4g1111 941 SMART LRR_typ_2 232 256 IPR003591 -
Mtr4g1111 941 SMART LRR_typ_2 521 545 IPR003591 -
Mtr4g1111 941 SMART LRR_typ_2 103 127 IPR003591 -
Mtr4g1111 941 SMART LRR_typ_2 280 304 IPR003591 -
Mtr4g1111 941 PRINTS Leucine-rich repeat signature 130 143 - -
Mtr4g1111 941 PRINTS Leucine-rich repeat signature 400 413 - -
Mtr4g1111 941 ProSiteProfiles Protein kinase domain profile. 669 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1111 941 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 6 940 - -
Mtr4g1111 941 SUPERFAMILY RNI-like 248 586 - -
Mtr4g1111 941 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Mtr4g1111 941 SUPERFAMILY Protein kinase-like (PK-like) 642 936 IPR011009 -
Mtr4g1111 941 Gene3D Ribonuclease Inhibitor 255 347 IPR032675 -
Mtr4g1111 941 Gene3D Ribonuclease Inhibitor 348 465 IPR032675 -
Mtr4g1111 941 Gene3D Ribonuclease Inhibitor 466 603 IPR032675 -
Mtr4g1111 941 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 940 - -
Mtr4g1111 941 Gene3D Ribonuclease Inhibitor 180 254 IPR032675 -
Mtr4g1111 941 Gene3D Phosphorylase Kinase; domain 1 630 748 - -
Mtr4g1111 941 Pfam Leucine rich repeat 402 460 IPR001611 GO:0005515
Mtr4g1111 941 Pfam Leucine rich repeat 503 558 IPR001611 GO:0005515
Mtr4g1111 941 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Mtr4g1111 941 ProSitePatterns Protein kinases ATP-binding region signature. 675 698 IPR017441 GO:0005524
Mtr4g1111 941 ProSitePatterns Tyrosine protein kinases specific active-site signature. 794 806 IPR008266 GO:0004672|GO:0006468
Mtr4g1111 941 Pfam Protein kinase domain 672 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1111 941 Gene3D Ribonuclease Inhibitor 34 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1111 Mtr-Chr4 14714015 14717216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1111 14 842 Receptor kinase-like Gene Family AT4G08850 39.527 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g1111 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1111 - - aprc:113866080 1417.91