Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1091 ATGTCCAACCTTAACCATATGCATACATTTCCAATTCAAGCTACTTTGTTGGTTTCTTTGTTGCTAGCTCTATGCCAAATCACTTCAGGACTGACACAATTTGAAGCCTTGTTAAAGTGGAAACAAAGTCTCCCTCAACAACCAATTCTTGATTCATGGATCATTAACAACTCTAGTTCAACACAAACACCATGTTTATGGAGAGGTATCACTTGTGATGATTCTAAAGGAAGTGTTACAATCATAAACTTGGCATATACTGGACTTGAAGGTACTCTTAATCACTTAAATTTGTCGGTTTTTCCTAACCTTGTTCGTCTTGATCTTAAAACAAACAATCTCACCGGTGTTATACCTGAAAACATCGGTGTTCTTTCGAAACTTCAATTTCTTGATCTTTCTACAAATTATCTCAATGGAACTTTGCCTCTTTCTATAGCTAATTTGACTCAAGTTTATGAGCTTGATGTTTCAAGAAACGATGTGTCTGGTATATTAGACCGTCGTTTGTTTCCTGATGGCACTGATAAGCCCAGTTCTGGGCTTATCAGTATCAGGAATCTACTTTTCCAAGATACCCTTTTGGGCGGTCGATTACCAAACGAAATAGGGAACATAAAAAACTTGACTATACTAGCACTTGATGGAAACAATTTCTTTGGTCCTATTCCTTCATCTTTAGGAAACTGTAAACATTTAAGCATTCTAAGATTGAATGAAAACCAATTATCTGGCTCAATACCACCAAGTATTGGCAAATTGACCAACCTAACTGATGTAAGGTTTTTCACCAATAACCTAAATGGCACCGTGCCACAAGAATTTGGAAACCTTTCATCTTTGGTTGTTTTACATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCTCAAGTTTGCAAAAGTGGCAAACTTTTGAATTTCAGTGCATCCTTTAACAGTTTCACTGGTCCAATTCCAATAAGTCTTAGAAACTGCCCTTCTTTGTATAGAGTTAGACTTGAATACAACCAGTTAACCGGTTACGCAGATCAAGATTTTGGAGTTTATCCAAATCTTACTTACATGGATTTCAGCTATAATGCGGTCCAAGGTGGTTTATCTTCTAAATGGGGATCCTGTAAAAACTTGCAATACCTGAGTTTGGCTGGTAATTCAGTGAATGGAAAAATTCCCAGTGAGATTTTTCAATTGGAACAATTACAAGAGCTTGATCTATCCTATAACCAATTATCAGGAACTATTCCTCCACAAATTGGAAATGCTTCAAATTTGTATCAATTAAATTTGGGTGGAAATAGGCTTTCTGGTAAGATACCAATTGAAATTGGAAAGCTTTCAAATTTGCAATACTTAGACCTTTCAATGAATTCGTTTTTAGGAGAAATTCCAATTCAGATAGGTGATTGTTCCAATTTGCTGAATTTAAATTTGAGTAACAATCACTTGAATGGCTCAATTCCTTTCCAAATTGGAAACCTTGGATCATTACAAGACTTTTTGGATTTGAGTTACAATTCATTTTCAGGGGAAATTCCATCTAATATTGGTAAGCTTTCAAATTTGATAAGCTTGAATATCTCAAACAACAATTTGTCAGGTAAAGTACCTAATCAAATCAGTGGAATGTTGAGTTTGTCAAGTCTCAACCTCTCTTACAATCATTTGGAGGGGAATGTTCCTAAGAGTGGCATTTTCAAATTAAACTCTTCTCATGCACTTGACTTGAGCAACAACCAAGATCTATGTGGTAGTTTCAAGGGTTTGATACCTTGTAATGTTTCATCAAGTGAACCAAGTGATGGAGGAAGTAACAAAAAAAAGGTTGTGATTCCAATCGTTGCTTCTTTAGGAGGTGCGCTTTTTCTTTCATTGGTAATTGTTGGCGTAATTTTGTTATGCTACAAGAAAAAATCAAGAACTTTACGAAAGTCTTCCTTTAAGATGCCAAATCCATTTTCAATTTGGTACTTCAATGGAAGAGTTGTATATAGCGACATAATTGAAGCTACCAACAATTTCGACAACAAGTATTGCATTGGCGAAGGCGCGTTTGGAAATGTTTACAAAGCCGAACTGAAAGGAGGTCAAATATTTGCGGTGAAAAAGCTGAAATGTGATGAAGAAAACTTAGACACCGAGAGTATAAAAACATTTGAAAGTGAGGTTGAAGCTATGACAGAAACAAGGCACAGAAACATTGTGAAGCTTTATGGATTTTGTTGTGAAGGGATGCACACATTTCTTGTTTATGAGTATATGGATCGAGGGAGTTTAGAGGATATGTTGATTGATGATAAGAGAGCATTAGAGCTTGATTGGTCTAAACGGTTTGAGATTGTTAAAGGTGTTGCGAGTGCTCTCTCTTATATGCATCATGATTGTTCTCCAGCTTTGATTCATAGAGATATATCAAGCAAGAATGTTTTGTTATCGAAAAATCTTGAAGCTCATGTCTCAGATTTTGGTACTGCAAGGTTTCTTAAGCCAAATTCGCCTATTTGGACTTCATTTGCCGGCACATATGGTTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAAAAATGTGATGTATTCAGCTTTGGTGTTTTAGCATTTGAGATTCTAACAGGAAAGCACCCTAGTGATCTTGTTTCTTACATACAAACATCAAATGATCAAAAGATTGACTTCAAAGAAATTTTAGACCCTCGTTTACCTTCTCCTCCAAAGAACATTTTGAAGGAATTGGCATTGGTTGCAAATTTAGCTCTTTCTTGTTTACATACACACCCTCAATCAAGACCTACTATGAGAAGTGTAGCACAATTTCTAGAAATGGAGAGCACATAA 2841 0.3611 MSNLNHMHTFPIQATLLVSLLLALCQITSGLTQFEALLKWKQSLPQQPILDSWIINNSSSTQTPCLWRGITCDDSKGSVTIINLAYTGLEGTLNHLNLSVFPNLVRLDLKTNNLTGVIPENIGVLSKLQFLDLSTNYLNGTLPLSIANLTQVYELDVSRNDVSGILDRRLFPDGTDKPSSGLISIRNLLFQDTLLGGRLPNEIGNIKNLTILALDGNNFFGPIPSSLGNCKHLSILRLNENQLSGSIPPSIGKLTNLTDVRFFTNNLNGTVPQEFGNLSSLVVLHLAENNFIGELPPQVCKSGKLLNFSASFNSFTGPIPISLRNCPSLYRVRLEYNQLTGYADQDFGVYPNLTYMDFSYNAVQGGLSSKWGSCKNLQYLSLAGNSVNGKIPSEIFQLEQLQELDLSYNQLSGTIPPQIGNASNLYQLNLGGNRLSGKIPIEIGKLSNLQYLDLSMNSFLGEIPIQIGDCSNLLNLNLSNNHLNGSIPFQIGNLGSLQDFLDLSYNSFSGEIPSNIGKLSNLISLNISNNNLSGKVPNQISGMLSLSSLNLSYNHLEGNVPKSGIFKLNSSHALDLSNNQDLCGSFKGLIPCNVSSSEPSDGGSNKKKVVIPIVASLGGALFLSLVIVGVILLCYKKKSRTLRKSSFKMPNPFSIWYFNGRVVYSDIIEATNNFDNKYCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDTESIKTFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGSLEDMLIDDKRALELDWSKRFEIVKGVASALSYMHHDCSPALIHRDISSKNVLLSKNLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPSDLVSYIQTSNDQKIDFKEILDPRLPSPPKNILKELALVANLALSCLHTHPQSRPTMRSVAQFLEMEST* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 347 438 IPR032675 -
Mtr4g1091 946 Pfam Protein kinase domain 677 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1091 946 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Mtr4g1091 946 SUPERFAMILY L domain-like 51 307 - -
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 175 249 IPR032675 -
Mtr4g1091 946 SUPERFAMILY Protein kinase-like (PK-like) 646 942 IPR011009 -
Mtr4g1091 946 SMART LRR_typ_2 519 542 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 398 422 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 230 254 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 278 302 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 543 568 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 446 470 IPR003591 -
Mtr4g1091 946 SMART LRR_typ_2 125 149 IPR003591 -
Mtr4g1091 946 Pfam Leucine rich repeat 501 556 IPR001611 GO:0005515
Mtr4g1091 946 Pfam Leucine rich repeat 400 458 IPR001611 GO:0005515
Mtr4g1091 946 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 32 174 IPR032675 -
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 439 499 IPR032675 -
Mtr4g1091 946 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 945 - -
Mtr4g1091 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 799 811 IPR008266 GO:0004672|GO:0006468
Mtr4g1091 946 SMART serkin_6 674 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1091 946 Gene3D Transferase(Phosphotransferase) domain 1 754 946 - -
Mtr4g1091 946 PRINTS Leucine-rich repeat signature 128 141 - -
Mtr4g1091 946 PRINTS Leucine-rich repeat signature 398 411 - -
Mtr4g1091 946 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Mtr4g1091 946 Gene3D Phosphorylase Kinase; domain 1 636 753 - -
Mtr4g1091 946 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 2 945 - -
Mtr4g1091 946 ProSiteProfiles Protein kinase domain profile. 674 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1091 946 SUPERFAMILY RNI-like 246 584 - -
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 500 600 IPR032675 -
Mtr4g1091 946 Gene3D Ribonuclease Inhibitor 250 346 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1091 Mtr-Chr4 14369773 14373030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1091 12 847 Receptor kinase-like Gene Family AT4G08850 40.000 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g1091 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1091 - - aprc:113866080 1464.13